Jiménez JI - Search Results

1

Regulatory perturbations of ribosome allocation in bacteria reshape the growth proteome with a trade-off in adaptation capacity.

Hidalgo D, Martínez-Ortiz CA, Palsson BO, Jiménez JI, Utrilla J. Hidalgo D, et al. Among authors: jimenez ji. iScience. 2022 Feb 7;25(3):103879. doi: 10.1016/j.isci.2022.103879. eCollection 2022 Mar 18. iScience. 2022. PMID: 35243241 Free PMC article.

2

Trade-offs between gene expression, growth and phenotypic diversity in microbial populations.

Kim J, Darlington A, Salvador M, Utrilla J, Jiménez JI. Kim J, et al. Among authors: jimenez ji. Curr Opin Biotechnol. 2020 Apr;62:29-37. doi: 10.1016/j.copbio.2019.08.004. Epub 2019 Oct 1. Curr Opin Biotechnol. 2020. PMID: 31580950 Free PMC article. Review.

3

A quantitative method for proteome reallocation using minimal regulatory interventions.

Lastiri-Pancardo G, Mercado-Hernández JS, Kim J, Jiménez JI, Utrilla J. Lastiri-Pancardo G, et al. Among authors: jimenez ji. Nat Chem Biol. 2020 Sep;16(9):1026-1033. doi: 10.1038/s41589-020-0593-y. Epub 2020 Jul 13. Nat Chem Biol. 2020. PMID: 32661378

4

Author Correction: A quantitative method for proteome reallocation using minimal regulatory interventions.

Lastiri-Pancardo G, Mercado-Hernández JS, Kim J, Jiménez JI, Utrilla J. Lastiri-Pancardo G, et al. Among authors: jimenez ji. Nat Chem Biol. 2020 Nov;16(11):1277. doi: 10.1038/s41589-020-00666-6. Nat Chem Biol. 2020. PMID: 32908298

5

Dynamic allocation of orthogonal ribosomes facilitates uncoupling of co-expressed genes.

Darlington APS, Kim J, Jiménez JI, Bates DG. Darlington APS, et al. Among authors: jimenez ji. Nat Commun. 2018 Feb 15;9(1):695. doi: 10.1038/s41467-018-02898-6. Nat Commun. 2018. PMID: 29449554 Free PMC article.

6

Loss of a pyoverdine secondary receptor in Pseudomonas aeruginosa results in a fitter strain suitable for population invasion.

González J, Salvador M, Özkaya Ö, Spick M, Reid K, Costa C, Bailey MJ, Avignone Rossa C, Kümmerli R, Jiménez JI. González J, et al. Among authors: jimenez ji. ISME J. 2021 May;15(5):1330-1343. doi: 10.1038/s41396-020-00853-2. Epub 2020 Dec 15. ISME J. 2021. PMID: 33323977 Free PMC article.

7

A Comprehensive Review of the Current and Future Role of the Microbiome in Pancreatic Ductal Adenocarcinoma.

Merali N, Chouari T, Kayani K, Rayner CJ, Jiménez JI, Krell J, Giovannetti E, Bagwan I, Relph K, Rockall TA, Dhillon T, Pandha H, Annels NE, Frampton AE. Merali N, et al. Among authors: jimenez ji. Cancers (Basel). 2022 Feb 17;14(4):1020. doi: 10.3390/cancers14041020. Cancers (Basel). 2022. PMID: 35205769 Free PMC article. Review.

8

Genome analysis of the metabolically versatile Pseudomonas umsongensis GO16: the genetic basis for PET monomer upcycling into polyhydroxyalkanoates.

Narancic T, Salvador M, Hughes GM, Beagan N, Abdulmutalib U, Kenny ST, Wu H, Saccomanno M, Um J, O'Connor KE, Jiménez JI. Narancic T, et al. Among authors: jimenez ji. Microb Biotechnol. 2021 Nov;14(6):2463-2480. doi: 10.1111/1751-7915.13712. Epub 2021 Jan 6. Microb Biotechnol. 2021. PMID: 33404203 Free PMC article.

9

Engineering Translational Resource Allocation Controllers: Mechanistic Models, Design Guidelines, and Potential Biological Implementations.

Darlington APS, Kim J, Jiménez JI, Bates DG. Darlington APS, et al. Among authors: jimenez ji. ACS Synth Biol. 2018 Nov 16;7(11):2485-2496. doi: 10.1021/acssynbio.8b00029. Epub 2018 Oct 22. ACS Synth Biol. 2018. PMID: 30346148

10

Bile Microbiome Signatures Associated with Pancreatic Ductal Adenocarcinoma Compared to Benign Disease: A UK Pilot Study.

Merali N, Chouari T, Terroire J, Jessel MD, Liu DSK, Smith JH, Wooldridge T, Dhillon T, Jiménez JI, Krell J, Roberts KJ, Rockall TA, Velliou E, Sivakumar S, Giovannetti E, Demirkan A, Annels NE, Frampton AE. Merali N, et al. Among authors: jimenez ji. Int J Mol Sci. 2023 Nov 28;24(23):16888. doi: 10.3390/ijms242316888. Int J Mol Sci. 2023. PMID: 38069211 Free PMC article.

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