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SNP-Seek database of SNPs derived from 3000 rice genomes.
Alexandrov N, Tai S, Wang W, Mansueto L, Palis K, Fuentes RR, Ulat VJ, Chebotarov D, Zhang G, Li Z, Mauleon R, Hamilton RS, McNally KL. Alexandrov N, et al. Among authors: mcnally kl. Nucleic Acids Res. 2015 Jan;43(Database issue):D1023-7. doi: 10.1093/nar/gku1039. Epub 2014 Nov 27. Nucleic Acids Res. 2015. PMID: 25429973 Free PMC article.
Environmental Response and Genomic Regions Correlated with Rice Root Growth and Yield under Drought in the OryzaSNP Panel across Multiple Study Systems.
Wade LJ, Bartolome V, Mauleon R, Vasant VD, Prabakar SM, Chelliah M, Kameoka E, Nagendra K, Reddy KR, Varma CM, Patil KG, Shrestha R, Al-Shugeairy Z, Al-Ogaidi F, Munasinghe M, Gowda V, Semon M, Suralta RR, Shenoy V, Vadez V, Serraj R, Shashidhar HE, Yamauchi A, Babu RC, Price A, McNally KL, Henry A. Wade LJ, et al. Among authors: mcnally kl. PLoS One. 2015 Apr 24;10(4):e0124127. doi: 10.1371/journal.pone.0124127. eCollection 2015. PLoS One. 2015. PMID: 25909711 Free PMC article.
Rice SNP-seek database update: new SNPs, indels, and queries.
Mansueto L, Fuentes RR, Borja FN, Detras J, Abriol-Santos JM, Chebotarov D, Sanciangco M, Palis K, Copetti D, Poliakov A, Dubchak I, Solovyev V, Wing RA, Hamilton RS, Mauleon R, McNally KL, Alexandrov N. Mansueto L, et al. Among authors: mcnally kl. Nucleic Acids Res. 2017 Jan 4;45(D1):D1075-D1081. doi: 10.1093/nar/gkw1135. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27899667 Free PMC article.
Genomic variation in 3,010 diverse accessions of Asian cultivated rice.
Wang W, Mauleon R, Hu Z, Chebotarov D, Tai S, Wu Z, Li M, Zheng T, Fuentes RR, Zhang F, Mansueto L, Copetti D, Sanciangco M, Palis KC, Xu J, Sun C, Fu B, Zhang H, Gao Y, Zhao X, Shen F, Cui X, Yu H, Li Z, Chen M, Detras J, Zhou Y, Zhang X, Zhao Y, Kudrna D, Wang C, Li R, Jia B, Lu J, He X, Dong Z, Xu J, Li Y, Wang M, Shi J, Li J, Zhang D, Lee S, Hu W, Poliakov A, Dubchak I, Ulat VJ, Borja FN, Mendoza JR, Ali J, Li J, Gao Q, Niu Y, Yue Z, Naredo MEB, Talag J, Wang X, Li J, Fang X, Yin Y, Glaszmann JC, Zhang J, Li J, Hamilton RS, Wing RA, Ruan J, Zhang G, Wei C, Alexandrov N, McNally KL, Li Z, Leung H. Wang W, et al. Among authors: mcnally kl. Nature. 2018 May;557(7703):43-49. doi: 10.1038/s41586-018-0063-9. Epub 2018 Apr 25. Nature. 2018. PMID: 29695866 Free PMC article.
An imputation platform to enhance integration of rice genetic resources.
Wang DR, Agosto-Pérez FJ, Chebotarov D, Shi Y, Marchini J, Fitzgerald M, McNally KL, Alexandrov N, McCouch SR. Wang DR, et al. Among authors: mcnally kl. Nat Commun. 2018 Aug 29;9(1):3519. doi: 10.1038/s41467-018-05538-1. Nat Commun. 2018. PMID: 30158584 Free PMC article.
Genome Wide Association Mapping of Grain and Straw Biomass Traits in the Rice Bengal and Assam Aus Panel (BAAP) Grown Under Alternate Wetting and Drying and Permanently Flooded Irrigation.
Norton GJ, Travis AJ, Douglas A, Fairley S, Alves EP, Ruang-Areerate P, Naredo MEB, McNally KL, Hossain M, Islam MR, Price AH. Norton GJ, et al. Among authors: mcnally kl. Front Plant Sci. 2018 Sep 3;9:1223. doi: 10.3389/fpls.2018.01223. eCollection 2018. Front Plant Sci. 2018. PMID: 30233605 Free PMC article.
96 results