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Improved Bst DNA Polymerase Variants Derived via a Machine Learning Approach.
Paik I, Ngo PHT, Shroff R, Diaz DJ, Maranhao AC, Walker DJF, Bhadra S, Ellington AD. Paik I, et al. Among authors: ellington ad. Biochemistry. 2023 Jan 17;62(2):410-418. doi: 10.1021/acs.biochem.1c00451. Epub 2021 Nov 11. Biochemistry. 2023. PMID: 34762799 Free PMC article.
Machine learning-aided engineering of hydrolases for PET depolymerization.
Lu H, Diaz DJ, Czarnecki NJ, Zhu C, Kim W, Shroff R, Acosta DJ, Alexander BR, Cole HO, Zhang Y, Lynd NA, Ellington AD, Alper HS. Lu H, et al. Among authors: ellington ad. Nature. 2022 Apr;604(7907):662-667. doi: 10.1038/s41586-022-04599-z. Epub 2022 Apr 27. Nature. 2022. PMID: 35478237
GroovDB: A Database of Ligand-Inducible Transcription Factors.
d'Oelsnitz S, Love JD, Diaz DJ, Ellington AD. d'Oelsnitz S, et al. Among authors: ellington ad. ACS Synth Biol. 2022 Oct 21;11(10):3534-3537. doi: 10.1021/acssynbio.2c00382. Epub 2022 Sep 30. ACS Synth Biol. 2022. PMID: 36178800
Biosensor and machine learning-aided engineering of an amaryllidaceae enzyme.
d'Oelsnitz S, Diaz DJ, Kim W, Acosta DJ, Dangerfield TL, Schechter MW, Minus MB, Howard JR, Do H, Loy JM, Alper HS, Zhang YJ, Ellington AD. d'Oelsnitz S, et al. Among authors: ellington ad. Nat Commun. 2024 Mar 7;15(1):2084. doi: 10.1038/s41467-024-46356-y. Nat Commun. 2024. PMID: 38453941 Free PMC article.
AANT: the Amino Acid-Nucleotide Interaction Database.
Hoffman MM, Khrapov MA, Cox JC, Yao J, Tong L, Ellington AD. Hoffman MM, et al. Among authors: ellington ad. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D174-81. doi: 10.1093/nar/gkh128. Nucleic Acids Res. 2004. PMID: 14681388 Free PMC article.
480 results