Sozzani R - Search Results

1

Spatiotemporal Gene Expression Profiling and Network Inference: A Roadmap for Analysis, Visualization, and Key Gene Identification.

Spurney R, Schwartz M, Gobble M, Sozzani R, Van den Broeck L. Spurney R, et al. Among authors: sozzani r. Methods Mol Biol. 2021;2328:47-65. doi: 10.1007/978-1-0716-1534-8_4. Methods Mol Biol. 2021. PMID: 34251619

2

Measuring Protein Movement, Oligomerization State, and Protein-Protein Interaction in Arabidopsis Roots Using Scanning Fluorescence Correlation Spectroscopy (Scanning FCS).

Clark NM, Sozzani R. Clark NM, et al. Among authors: sozzani r. Methods Mol Biol. 2017;1610:251-266. doi: 10.1007/978-1-4939-7003-2_16. Methods Mol Biol. 2017. PMID: 28439868

3

Inferring Gene Regulatory Networks in the Arabidopsis Root Using a Dynamic Bayesian Network Approach.

de Luis Balaguer MA, Sozzani R. de Luis Balaguer MA, et al. Among authors: sozzani r. Methods Mol Biol. 2017;1629:331-348. doi: 10.1007/978-1-4939-7125-1_21. Methods Mol Biol. 2017. PMID: 28623595

4

Predicting gene regulatory networks by combining spatial and temporal gene expression data in Arabidopsis root stem cells.

de Luis Balaguer MA, Fisher AP, Clark NM, Fernandez-Espinosa MG, Möller BK, Weijers D, Lohmann JU, Williams C, Lorenzo O, Sozzani R. de Luis Balaguer MA, et al. Among authors: sozzani r. Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):E7632-E7640. doi: 10.1073/pnas.1707566114. Epub 2017 Aug 21. Proc Natl Acad Sci U S A. 2017. PMID: 28827319 Free PMC article.

5

Identifying Differentially Expressed Genes Using Fluorescence-Activated Cell Sorting (FACS) and RNA Sequencing from Low Input Samples.

Clark NM, Fisher AP, Sozzani R. Clark NM, et al. Among authors: sozzani r. Methods Mol Biol. 2018;1819:139-151. doi: 10.1007/978-1-4939-8618-7_6. Methods Mol Biol. 2018. PMID: 30421402

6

Computational prediction of gene regulatory networks in plant growth and development.

Haque S, Ahmad JS, Clark NM, Williams CM, Sozzani R. Haque S, et al. Among authors: sozzani r. Curr Opin Plant Biol. 2019 Feb;47:96-105. doi: 10.1016/j.pbi.2018.10.005. Epub 2018 Nov 14. Curr Opin Plant Biol. 2019. PMID: 30445315 Review.

7

tuxnet: a simple interface to process RNA sequencing data and infer gene regulatory networks.

Spurney RJ, Van den Broeck L, Clark NM, Fisher AP, de Luis Balaguer MA, Sozzani R. Spurney RJ, et al. Among authors: sozzani r. Plant J. 2020 Feb;101(3):716-730. doi: 10.1111/tpj.14558. Epub 2019 Nov 27. Plant J. 2020. PMID: 31571287 Free article.

8

Novel Imaging Modalities Shedding Light on Plant Biology: Start Small and Grow Big.

Clark NM, Van den Broeck L, Guichard M, Stager A, Tanner HG, Blilou I, Grossmann G, Iyer-Pascuzzi AS, Maizel A, Sparks EE, Sozzani R. Clark NM, et al. Among authors: sozzani r. Annu Rev Plant Biol. 2020 Apr 29;71:789-816. doi: 10.1146/annurev-arplant-050718-100038. Epub 2020 Mar 2. Annu Rev Plant Biol. 2020. PMID: 32119794

9

Protein complex stoichiometry and expression dynamics of transcription factors modulate stem cell division.

Clark NM, Fisher AP, Berckmans B, Van den Broeck L, Nelson EC, Nguyen TT, Bustillo-Avendaño E, Zebell SG, Moreno-Risueno MA, Simon R, Gallagher KL, Sozzani R. Clark NM, et al. Among authors: sozzani r. Proc Natl Acad Sci U S A. 2020 Jun 30;117(26):15332-15342. doi: 10.1073/pnas.2002166117. Epub 2020 Jun 15. Proc Natl Acad Sci U S A. 2020. PMID: 32541020 Free PMC article.

10

Gene Regulatory Network Inference: Connecting Plant Biology and Mathematical Modeling.

Van den Broeck L, Gordon M, Inzé D, Williams C, Sozzani R. Van den Broeck L, et al. Among authors: sozzani r. Front Genet. 2020 May 25;11:457. doi: 10.3389/fgene.2020.00457. eCollection 2020. Front Genet. 2020. PMID: 32547596 Free PMC article. Review.

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