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Pervasive transcription of the mitochondrial genome in Candida albicans is revealed in mutants lacking the mtEXO RNase complex.
RNA Biol. 2021 Oct 15;18(sup1):303-317. doi: 10.1080/15476286.2021.1943929. Epub 2021 Jul 7.
RNA Biol. 2021.
PMID: 34229573
Free PMC article.
The Mediator complex regulates enhancer-promoter interactions.
Ramasamy S, Aljahani A, Karpinska MA, Cao TBN, Velychko T, Cruz JN, Lidschreiber M, Oudelaar AM.
Ramasamy S, et al. Among authors: karpinska ma.
Nat Struct Mol Biol. 2023 Jul;30(7):991-1000. doi: 10.1038/s41594-023-01027-2. Epub 2023 Jul 10.
Nat Struct Mol Biol. 2023.
PMID: 37430065
Free PMC article.
Item in Clipboard
Author Correction: Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture.
Downes DJ, Smith AL, Karpinska MA, Velychko T, Rue-Albrecht K, Sims D, Milne TA, Davies JOJ, Oudelaar AM, Hughes JR.
Downes DJ, et al. Among authors: karpinska ma.
Nat Protoc. 2023 Oct;18(10):3155. doi: 10.1038/s41596-023-00860-5.
Nat Protoc. 2023.
PMID: 37369851
No abstract available.
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The role of loop extrusion in enhancer-mediated gene activation.
Karpinska MA, Oudelaar AM.
Karpinska MA, et al.
Curr Opin Genet Dev. 2023 Apr;79:102022. doi: 10.1016/j.gde.2023.102022. Epub 2023 Feb 24.
Curr Opin Genet Dev. 2023.
PMID: 36842325
Free article.
Review.
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Analysis of sub-kilobase chromatin topology reveals nano-scale regulatory interactions with variable dependence on cohesin and CTCF.
Aljahani A, Hua P, Karpinska MA, Quililan K, Davies JOJ, Oudelaar AM.
Aljahani A, et al. Among authors: karpinska ma.
Nat Commun. 2022 Apr 19;13(1):2139. doi: 10.1038/s41467-022-29696-5.
Nat Commun. 2022.
PMID: 35440598
Free PMC article.
Item in Clipboard
Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture.
Downes DJ, Smith AL, Karpinska MA, Velychko T, Rue-Albrecht K, Sims D, Milne TA, Davies JOJ, Oudelaar AM, Hughes JR.
Downes DJ, et al. Among authors: karpinska ma.
Nat Protoc. 2022 Feb;17(2):445-475. doi: 10.1038/s41596-021-00651-w. Epub 2022 Feb 4.
Nat Protoc. 2022.
PMID: 35121852
Free PMC article.
Review.
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