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Promoter-sequence determinants and structural basis of primer-dependent transcription initiation in Escherichia coli.
Proc Natl Acad Sci U S A. 2021 Jul 6;118(27):e2106388118. doi: 10.1073/pnas.2106388118.
Proc Natl Acad Sci U S A. 2021.
PMID: 34187896
Free PMC article.
A Conserved Pattern of Primer-Dependent Transcription Initiation in Escherichia coli and Vibrio cholerae Revealed by 5' RNA-seq.
Druzhinin SY, Tran NT, Skalenko KS, Goldman SR, Knoblauch JG, Dove SL, Nickels BE.
Druzhinin SY, et al. Among authors: skalenko ks.
PLoS Genet. 2015 Jul 1;11(7):e1005348. doi: 10.1371/journal.pgen.1005348. eCollection 2015 Jul.
PLoS Genet. 2015.
PMID: 26131907
Free PMC article.
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Exploring Ribosome-Positioning on Translating Transcripts with Ribosome Profiling.
Cope AL, Vellappan S, Favate JS, Skalenko KS, Yadavalli SS, Shah P.
Cope AL, et al. Among authors: skalenko ks.
Methods Mol Biol. 2022;2404:83-110. doi: 10.1007/978-1-0716-1851-6_5.
Methods Mol Biol. 2022.
PMID: 34694605
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Structural and mechanistic basis of σ-dependent transcriptional pausing.
Pukhrambam C, Molodtsov V, Kooshkbaghi M, Tareen A, Vu H, Skalenko KS, Su M, Yin Z, Winkelman JT, Kinney JB, Ebright RH, Nickels BE.
Pukhrambam C, et al. Among authors: skalenko ks.
Proc Natl Acad Sci U S A. 2022 Jun 7;119(23):e2201301119. doi: 10.1073/pnas.2201301119. Epub 2022 Jun 2.
Proc Natl Acad Sci U S A. 2022.
PMID: 35653571
Free PMC article.
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Linking genotypic and phenotypic changes in the E. coli long-term evolution experiment using metabolomics.
Favate JS, Skalenko KS, Chiles E, Su X, Yadavalli SS, Shah P.
Favate JS, et al. Among authors: skalenko ks.
Elife. 2023 Nov 22;12:RP87039. doi: 10.7554/eLife.87039.
Elife. 2023.
PMID: 37991493
Free PMC article.
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Engineered Regulon to Enable Autonomous Azide Ion Biosensing, Recombinant Protein Production, and in Vivo Glycoengineering.
Bandi CK, Skalenko KS, Agrawal A, Sivaneri N, Thiry M, Chundawat SPS.
Bandi CK, et al. Among authors: skalenko ks.
ACS Synth Biol. 2021 Apr 16;10(4):682-689. doi: 10.1021/acssynbio.0c00449. Epub 2021 Mar 22.
ACS Synth Biol. 2021.
PMID: 33749248
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Linking genotypic and phenotypic changes in the E. coli Long-Term Evolution Experiment using metabolomics.
Favate JS, Skalenko KS, Chiles E, Su X, Yadavalli SS, Shah P.
Favate JS, et al. Among authors: skalenko ks.
bioRxiv [Preprint]. 2023 May 4:2023.02.15.528756. doi: 10.1101/2023.02.15.528756.
bioRxiv. 2023.
PMID: 36874203
Free PMC article.
Updated.
Preprint.
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