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Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees.
Cell Syst. 2021 Aug 18;12(8):810-826.e4. doi: 10.1016/j.cels.2021.05.008. Epub 2021 Jun 18.
Cell Syst. 2021.
PMID: 34146472
Free article.
Inference of single-cell phylogenies from lineage tracing data using Cassiopeia.
Jones MG, Khodaverdian A, Quinn JJ, Chan MM, Hussmann JA, Wang R, Xu C, Weissman JS, Yosef N.
Jones MG, et al. Among authors: khodaverdian a.
Genome Biol. 2020 Apr 14;21(1):92. doi: 10.1186/s13059-020-02000-8.
Genome Biol. 2020.
PMID: 32290857
Free PMC article.
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Connectivity problems on heterogeneous graphs.
Wu J, Khodaverdian A, Weitz B, Yosef N.
Wu J, et al. Among authors: khodaverdian a.
Algorithms Mol Biol. 2019 Mar 8;14:5. doi: 10.1186/s13015-019-0141-z. eCollection 2019.
Algorithms Mol Biol. 2019.
PMID: 30899321
Free PMC article.
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Molecular recording of mammalian embryogenesis.
Chan MM, Smith ZD, Grosswendt S, Kretzmer H, Norman TM, Adamson B, Jost M, Quinn JJ, Yang D, Jones MG, Khodaverdian A, Yosef N, Meissner A, Weissman JS.
Chan MM, et al. Among authors: khodaverdian a.
Nature. 2019 Jun;570(7759):77-82. doi: 10.1038/s41586-019-1184-5. Epub 2019 May 13.
Nature. 2019.
PMID: 31086336
Free PMC article.
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Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation.
Kreimer A, Ashuach T, Inoue F, Khodaverdian A, Deng C, Yosef N, Ahituv N.
Kreimer A, et al. Among authors: khodaverdian a.
Nat Commun. 2022 Mar 21;13(1):1504. doi: 10.1038/s41467-022-28659-0.
Nat Commun. 2022.
PMID: 35315433
Free PMC article.
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Theoretical guarantees for phylogeny inference from single-cell lineage tracing.
Wang R, Zhang R, Khodaverdian A, Yosef N.
Wang R, et al. Among authors: khodaverdian a.
Proc Natl Acad Sci U S A. 2023 Mar 21;120(12):e2203352120. doi: 10.1073/pnas.2203352120. Epub 2023 Mar 16.
Proc Natl Acad Sci U S A. 2023.
PMID: 36927151
Free PMC article.
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The influence of environmental and personal factors on participation of lower-limb prosthetic users in low-income countries: prosthetists' perspectives.
Kam S, Kent M, Khodaverdian A, Daiter L, Njelesani J, Cameron D, Andrysek J.
Kam S, et al. Among authors: khodaverdian a.
Disabil Rehabil Assist Technol. 2015 May;10(3):245-51. doi: 10.3109/17483107.2014.905643. Epub 2014 Apr 2.
Disabil Rehabil Assist Technol. 2015.
PMID: 24694038
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A comparison of medical and psychobehavioral emergency department visits made by adults with intellectual disabilities.
Lunsky Y, Balogh R, Khodaverdian A, Elliott D, Jaskulski C, Morris S.
Lunsky Y, et al. Among authors: khodaverdian a.
Emerg Med Int. 2012;2012:427407. doi: 10.1155/2012/427407. Epub 2012 Sep 29.
Emerg Med Int. 2012.
PMID: 23056948
Free PMC article.
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