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Fast Phylogeny Reconstruction from Genomes of Closely Related Microbes.
Methods Mol Biol. 2021;2242:77-89. doi: 10.1007/978-1-0716-1099-2_6.
Methods Mol Biol. 2021.
PMID: 33961219
andi: fast and accurate estimation of evolutionary distances between closely related genomes.
Haubold B, Klötzl F, Pfaffelhuber P.
Haubold B, et al. Among authors: klotzl f.
Bioinformatics. 2015 Apr 15;31(8):1169-75. doi: 10.1093/bioinformatics/btu815. Epub 2014 Dec 10.
Bioinformatics. 2015.
PMID: 25504847
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Phylonium: fast estimation of evolutionary distances from large samples of similar genomes.
Klötzl F, Haubold B.
Klötzl F, et al.
Bioinformatics. 2020 Apr 1;36(7):2040-2046. doi: 10.1093/bioinformatics/btz903.
Bioinformatics. 2020.
PMID: 31790149
Free PMC article.
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Support Values for Genome Phylogenies.
Klötzl F, Haubold B.
Klötzl F, et al.
Life (Basel). 2016 Mar 7;6(1):11. doi: 10.3390/life6010011.
Life (Basel). 2016.
PMID: 26959064
Free PMC article.
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hotspot: software to support sperm-typing for investigating recombination hotspots.
Odenthal-Hesse L, Dutheil JY, Klötzl F, Haubold B.
Odenthal-Hesse L, et al. Among authors: klotzl f.
Bioinformatics. 2016 Aug 15;32(16):2554-5. doi: 10.1093/bioinformatics/btw195. Epub 2016 Apr 13.
Bioinformatics. 2016.
PMID: 27153632
Free PMC article.
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Fur: Find unique genomic regions for diagnostic PCR.
Haubold B, Klötzl F, Hellberg L, Thompson D, Cavalar M.
Haubold B, et al. Among authors: klotzl f.
Bioinformatics. 2021 Aug 9;37(15):2081-2087. doi: 10.1093/bioinformatics/btab059.
Bioinformatics. 2021.
PMID: 33515232
Free PMC article.
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