Parisi G - Search Results

1

PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins.

Lazar T, Martínez-Pérez E, Quaglia F, Hatos A, Chemes LB, Iserte JA, Méndez NA, Garrone NA, Saldaño TE, Marchetti J, Rueda AJV, Bernadó P, Blackledge M, Cordeiro TN, Fagerberg E, Forman-Kay JD, Fornasari MS, Gibson TJ, Gomes GW, Gradinaru CC, Head-Gordon T, Jensen MR, Lemke EA, Longhi S, Marino-Buslje C, Minervini G, Mittag T, Monzon AM, Pappu RV, Parisi G, Ricard-Blum S, Ruff KM, Salladini E, Skepö M, Svergun D, Vallet SD, Varadi M, Tompa P, Tosatto SCE, Piovesan D. Lazar T, et al. Among authors: parisi g. Nucleic Acids Res. 2021 Jan 8;49(D1):D404-D411. doi: 10.1093/nar/gkaa1021. Nucleic Acids Res. 2021. PMID: 33305318 Free PMC article.

2

Evolutionary analysis of gamma-carbonic anhydrase and structurally related proteins.

Parisi G, Fornasari M, Echave J. Parisi G, et al. Mol Phylogenet Evol. 2000 Mar;14(3):323-34. doi: 10.1006/mpev.1999.0734. Mol Phylogenet Evol. 2000. PMID: 10712838

3

Site-specific amino acid replacement matrices from structurally constrained protein evolution simulations.

Fornasari MS, Parisi G, Echave J. Fornasari MS, et al. Among authors: parisi g. Mol Biol Evol. 2002 Mar;19(3):352-6. doi: 10.1093/oxfordjournals.molbev.a004089. Mol Biol Evol. 2002. PMID: 11861895 No abstract available.

4

Dynactins p25 and p27 are predicted to adopt the LbetaH fold.

Parisi G, Fornasari MS, Echave J. Parisi G, et al. FEBS Lett. 2004 Mar 26;562(1-3):1-4. doi: 10.1016/S0014-5793(04)00165-6. FEBS Lett. 2004. PMID: 15043994 Free article.

5

Starch-synthase III family encodes a tandem of three starch-binding domains.

Palopoli N, Busi MV, Fornasari MS, Gomez-Casati D, Ugalde R, Parisi G. Palopoli N, et al. Among authors: parisi g. Proteins. 2006 Oct 1;65(1):27-31. doi: 10.1002/prot.21007. Proteins. 2006. PMID: 16862594

6

Quaternary structure constraints on evolutionary sequence divergence.

Fornasari MS, Parisi G, Echave J. Fornasari MS, et al. Among authors: parisi g. Mol Biol Evol. 2007 Feb;24(2):349-51. doi: 10.1093/molbev/msl181. Epub 2006 Nov 23. Mol Biol Evol. 2007. PMID: 17124181

7

Functional and structural characterization of the catalytic domain of the starch synthase III from Arabidopsis thaliana.

Busi MV, Palopoli N, Valdez HA, Fornasari MS, Wayllace NZ, Gomez-Casati DF, Parisi G, Ugalde RA. Busi MV, et al. Among authors: parisi g. Proteins. 2008 Jan 1;70(1):31-40. doi: 10.1002/prot.21469. Proteins. 2008. PMID: 17623838

8

Teaching noncovalent interactions using protein molecular evolution.

Fornasari MS, Parisi G, Echave J. Fornasari MS, et al. Among authors: parisi g. Biochem Mol Biol Educ. 2008 Jul;36(4):284-6. doi: 10.1002/bmb.20195. Biochem Mol Biol Educ. 2008. PMID: 21591205 Free article.

9

Protein conformational diversity modulates sequence divergence.

Juritz E, Palopoli N, Fornasari MS, Fernandez-Alberti S, Parisi G. Juritz E, et al. Among authors: parisi g. Mol Biol Evol. 2013 Jan;30(1):79-87. doi: 10.1093/molbev/mss080. Epub 2012 Mar 6. Mol Biol Evol. 2013. PMID: 22396525

10

On the effect of protein conformation diversity in discriminating among neutral and disease related single amino acid substitutions.

Juritz E, Fornasari MS, Martelli PL, Fariselli P, Casadio R, Parisi G. Juritz E, et al. Among authors: parisi g. BMC Genomics. 2012 Jun 18;13 Suppl 4(Suppl 4):S5. doi: 10.1186/1471-2164-13-S4-S5. BMC Genomics. 2012. PMID: 22759653 Free PMC article.

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