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The cell line A-to-I RNA editing catalogue.
Schaffer AA, Kopel E, Hendel A, Picardi E, Levanon EY, Eisenberg E. Schaffer AA, et al. Nucleic Acids Res. 2020 Jun 19;48(11):5849-5858. doi: 10.1093/nar/gkaa305. Nucleic Acids Res. 2020. PMID: 32383740 Free PMC article.
Landscape of adenosine-to-inosine RNA recoding across human tissues.
Gabay O, Shoshan Y, Kopel E, Ben-Zvi U, Mann TD, Bressler N, Cohen-Fultheim R, Schaffer AA, Roth SH, Tzur Z, Levanon EY, Eisenberg E. Gabay O, et al. Among authors: schaffer aa. Nat Commun. 2022 Mar 4;13(1):1184. doi: 10.1038/s41467-022-28841-4. Nat Commun. 2022. PMID: 35246538 Free PMC article.
A-to-I RNA Editing in the Earliest-Diverging Eumetazoan Phyla.
Porath HT, Schaffer AA, Kaniewska P, Alon S, Eisenberg E, Rosenthal J, Levanon EY, Levy O. Porath HT, et al. Among authors: schaffer aa. Mol Biol Evol. 2017 Aug 1;34(8):1890-1901. doi: 10.1093/molbev/msx125. Mol Biol Evol. 2017. PMID: 28453786 Free PMC article.
PERCEPTION predicts patient response and resistance to treatment using single-cell transcriptomics of their tumors.
Sinha S, Vegesna R, Mukherjee S, Kammula AV, Dhruba SR, Wu W, Kerr DL, Nair NU, Jones MG, Yosef N, Stroganov OV, Grishagin I, Aldape KD, Blakely CM, Jiang P, Thomas CJ, Benes CH, Bivona TG, Schäffer AA, Ruppin E. Sinha S, et al. Among authors: schaffer aa. Nat Cancer. 2024 Apr 18. doi: 10.1038/s43018-024-00756-7. Online ahead of print. Nat Cancer. 2024. PMID: 38637658
Outcome differences by sex in oncology clinical trials.
Kammula AV, Schäffer AA, Rajagopal PS, Kurzrock R, Ruppin E. Kammula AV, et al. Among authors: schaffer aa. Nat Commun. 2024 Mar 23;15(1):2608. doi: 10.1038/s41467-024-46945-x. Nat Commun. 2024. PMID: 38521835 Free PMC article.
Chromosome 7 to the rescue: overcoming chromosome 10 loss in gliomas.
Nair NU, Schäffer AA, Gertz EM, Cheng K, Zerbib J, Sahu AD, Leor G, Shulman ED, Aldape KD, Ben-David U, Ruppin E. Nair NU, et al. Among authors: schaffer aa. bioRxiv [Preprint]. 2024 Jan 22:2024.01.17.576103. doi: 10.1101/2024.01.17.576103. bioRxiv. 2024. PMID: 38313282 Free PMC article. Preprint.
ClinGen guidance for use of the PP1/BS4 co-segregation and PP4 phenotype specificity criteria for sequence variant pathogenicity classification.
Biesecker LG, Byrne AB, Harrison SM, Pesaran T, Schäffer AA, Shirts BH, Tavtigian SV, Rehm HL; ClinGen Sequence Variant Interpretation Working Group. Biesecker LG, et al. Among authors: schaffer aa. Am J Hum Genet. 2024 Jan 4;111(1):24-38. doi: 10.1016/j.ajhg.2023.11.009. Epub 2023 Dec 15. Am J Hum Genet. 2024. PMID: 38103548 Free article.
301 results