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Dissemination and analysis of the quality assurance (QA) and quality control (QC) practices of LC-MS based untargeted metabolomics practitioners.
Evans AM, O'Donovan C, Playdon M, Beecher C, Beger RD, Bowden JA, Broadhurst D, Clish CB, Dasari S, Dunn WB, Griffin JL, Hartung T, Hsu PC, Huan T, Jans J, Jones CM, Kachman M, Kleensang A, Lewis MR, Monge ME, Mosley JD, Taylor E, Tayyari F, Theodoridis G, Torta F, Ubhi BK, Vuckovic D; Metabolomics Quality Assurance, Quality Control Consortium (mQACC). Evans AM, et al. Among authors: bowden ja. Metabolomics. 2020 Oct 12;16(10):113. doi: 10.1007/s11306-020-01728-5. Metabolomics. 2020. PMID: 33044703 Free PMC article.
Common cases of improper lipid annotation using high-resolution tandem mass spectrometry data and corresponding limitations in biological interpretation.
Koelmel JP, Ulmer CZ, Jones CM, Yost RA, Bowden JA. Koelmel JP, et al. Among authors: bowden ja. Biochim Biophys Acta Mol Cell Biol Lipids. 2017 Aug;1862(8):766-770. doi: 10.1016/j.bbalip.2017.02.016. Epub 2017 Mar 2. Biochim Biophys Acta Mol Cell Biol Lipids. 2017. PMID: 28263877 Free PMC article. Review. No abstract available.
Corrigendum to "Common cases of improper lipid annotation using high-resolution tandem mass spectrometry data and corresponding limitations in biological interpretation" [Biochim. Biophys. Acta 1862(8) (2017) 766-770].
Koelmel JP, Ulmer CZ, Jones CM, Yost RA, Bowden JA. Koelmel JP, et al. Among authors: bowden ja. Biochim Biophys Acta Mol Cell Biol Lipids. 2017 Sep;1862(9):1024. doi: 10.1016/j.bbalip.2017.06.013. Epub 2017 Jun 27. Biochim Biophys Acta Mol Cell Biol Lipids. 2017. PMID: 28648965 No abstract available.
Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950-Metabolites in Frozen Human Plasma.
Bowden JA, Heckert A, Ulmer CZ, Jones CM, Koelmel JP, Abdullah L, Ahonen L, Alnouti Y, Armando AM, Asara JM, Bamba T, Barr JR, Bergquist J, Borchers CH, Brandsma J, Breitkopf SB, Cajka T, Cazenave-Gassiot A, Checa A, Cinel MA, Colas RA, Cremers S, Dennis EA, Evans JE, Fauland A, Fiehn O, Gardner MS, Garrett TJ, Gotlinger KH, Han J, Huang Y, Neo AH, Hyötyläinen T, Izumi Y, Jiang H, Jiang H, Jiang J, Kachman M, Kiyonami R, Klavins K, Klose C, Köfeler HC, Kolmert J, Koal T, Koster G, Kuklenyik Z, Kurland IJ, Leadley M, Lin K, Maddipati KR, McDougall D, Meikle PJ, Mellett NA, Monnin C, Moseley MA, Nandakumar R, Oresic M, Patterson R, Peake D, Pierce JS, Post M, Postle AD, Pugh R, Qiu Y, Quehenberger O, Ramrup P, Rees J, Rembiesa B, Reynaud D, Roth MR, Sales S, Schuhmann K, Schwartzman ML, Serhan CN, Shevchenko A, Somerville SE, St John-Williams L, Surma MA, Takeda H, Thakare R, Thompson JW, Torta F, Triebl A, Trötzmüller M, Ubhayasekera SJK, Vuckovic D, Weir JM, Welti R, Wenk MR, Wheelock CE, Yao L, Yuan M, Zhao XH, Zhou S. Bowden JA, et al. J Lipid Res. 2017 Dec;58(12):2275-2288. doi: 10.1194/jlr.M079012. Epub 2017 Oct 6. J Lipid Res. 2017. PMID: 28986437 Free PMC article.
Examining heat treatment for stabilization of the lipidome.
Koelmel JP, Jones CM, Ulmer CZ, Garrett TJ, Yost RA, Schock TB, Bowden JA. Koelmel JP, et al. Among authors: bowden ja. Bioanalysis. 2018 Mar 1;10(5):291-305. doi: 10.4155/bio-2017-0209. Epub 2018 Feb 16. Bioanalysis. 2018. PMID: 29451398
Lipidomics for wildlife disease etiology and biomarker discovery: a case study of pansteatitis outbreak in South Africa.
Koelmel JP, Ulmer CZ, Fogelson S, Jones CM, Botha H, Bangma JT, Guillette TC, Luus-Powell WJ, Sara JR, Smit WJ, Albert K, Miller HA, Guillette MP, Olsen BC, Cochran JA, Garrett TJ, Yost RA, Bowden JA. Koelmel JP, et al. Among authors: bowden ja. Metabolomics. 2019 Mar 5;15(3):38. doi: 10.1007/s11306-019-1490-9. Metabolomics. 2019. PMID: 30838461 Free PMC article.
International Ring Trial of a High Resolution Targeted Metabolomics and Lipidomics Platform for Serum and Plasma Analysis.
Thompson JW, Adams KJ, Adamski J, Asad Y, Borts D, Bowden JA, Byram G, Dang V, Dunn WB, Fernandez F, Fiehn O, Gaul DA, Hühmer AF, Kalli A, Koal T, Koeniger S, Mandal R, Meier F, Naser FJ, O'Neil D, Pal A, Patti GJ, Pham-Tuan H, Prehn C, Raynaud FI, Shen T, Southam AD, St John-Williams L, Sulek K, Vasilopoulou CG, Viant M, Winder CL, Wishart D, Zhang L, Zheng J, Moseley MA. Thompson JW, et al. Among authors: bowden ja. Anal Chem. 2019 Nov 19;91(22):14407-14416. doi: 10.1021/acs.analchem.9b02908. Epub 2019 Nov 8. Anal Chem. 2019. PMID: 31638379 Free PMC article.
162 results