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Assessing the performance of methods for copy number aberration detection from single-cell DNA sequencing data.
PLoS Comput Biol. 2020 Jul 13;16(7):e1008012. doi: 10.1371/journal.pcbi.1008012. eCollection 2020 Jul.
PLoS Comput Biol. 2020.
PMID: 32658894
Free PMC article.
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SimSCSnTree: a simulator of single-cell DNA sequencing data.
Mallory XF, Nakhleh L.
Mallory XF, et al.
Bioinformatics. 2022 May 13;38(10):2912-2914. doi: 10.1093/bioinformatics/btac169.
Bioinformatics. 2022.
PMID: 35561189
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Methods for copy number aberration detection from single-cell DNA-sequencing data.
Mallory XF, Edrisi M, Navin N, Nakhleh L.
Mallory XF, et al.
Genome Biol. 2020 Aug 17;21(1):208. doi: 10.1186/s13059-020-02119-8.
Genome Biol. 2020.
PMID: 32807205
Free PMC article.
Review.
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Theoretical Analysis Reveals the Cost and Benefit of Proofreading in Coronavirus Genome Replication.
Mallory JD, Mallory XF, Kolomeisky AB, Igoshin OA.
Mallory JD, et al. Among authors: mallory xf.
J Phys Chem Lett. 2021 Mar 18;12(10):2691-2698. doi: 10.1021/acs.jpclett.1c00190. Epub 2021 Mar 10.
J Phys Chem Lett. 2021.
PMID: 33689357
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