Liang C - Search Results

1

Enhanced genome assembly and a new official gene set for Tribolium castaneum.

Herndon N, Shelton J, Gerischer L, Ioannidis P, Ninova M, Dönitz J, Waterhouse RM, Liang C, Damm C, Siemanowski J, Kitzmann P, Ulrich J, Dippel S, Oberhofer G, Hu Y, Schwirz J, Schacht M, Lehmann S, Montino A, Posnien N, Gurska D, Horn T, Seibert J, Vargas Jentzsch IM, Panfilio KA, Li J, Wimmer EA, Stappert D, Roth S, Schröder R, Park Y, Schoppmeier M, Chung HR, Klingler M, Kittelmann S, Friedrich M, Chen R, Altincicek B, Vilcinskas A, Zdobnov E, Griffiths-Jones S, Ronshaugen M, Stanke M, Brown SJ, Bucher G. Herndon N, et al. Among authors: liang c. BMC Genomics. 2020 Jan 14;21(1):47. doi: 10.1186/s12864-019-6394-6. BMC Genomics. 2020. PMID: 31937263 Free PMC article.

2

ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs).

Liang C, Wang G, Liu L, Ji G, Fang L, Liu Y, Carter K, Webb JS, Dean JF. Liang C, et al. BMC Genomics. 2007 May 29;8:134. doi: 10.1186/1471-2164-8-134. BMC Genomics. 2007. PMID: 17535431 Free PMC article.

3

Concerted action of the new Genomic Peptide Finder and AUGUSTUS allows for automated proteogenomic annotation of the Chlamydomonas reinhardtii genome.

Specht M, Stanke M, Terashima M, Naumann-Busch B, Janssen I, Höhner R, Hom EF, Liang C, Hippler M. Specht M, et al. Among authors: liang c. Proteomics. 2011 May;11(9):1814-23. doi: 10.1002/pmic.201000621. Epub 2011 Mar 22. Proteomics. 2011. PMID: 21432999 Free PMC article.

4

Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation.

Wu X, Liu M, Downie B, Liang C, Ji G, Li QQ, Hunt AG. Wu X, et al. Among authors: liang c. Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):12533-8. doi: 10.1073/pnas.1019732108. Epub 2011 Jul 11. Proc Natl Acad Sci U S A. 2011. PMID: 21746925 Free PMC article.

5

PeanutDB: an integrated bioinformatics web portal for Arachis hypogaea transcriptomics.

Duan X, Schmidt E, Li P, Lenox D, Liu L, Shu C, Zhang J, Liang C. Duan X, et al. Among authors: liang c. BMC Plant Biol. 2012 Jun 19;12:94. doi: 10.1186/1471-2229-12-94. BMC Plant Biol. 2012. PMID: 22712730 Free PMC article.

6

SCOPE++: sequence classification of homoPolymer emissions.

Morton JT, Abrudan P, Figueroa N, Liang C, Karro JE. Morton JT, et al. Among authors: liang c. Genomics. 2014 Sep;104(3):157-62. doi: 10.1016/j.ygeno.2014.07.005. Epub 2014 Aug 1. Genomics. 2014. PMID: 25087770 Free PMC article.

7

Transcriptome analysis reveals a lncRNA-miRNA-mRNA regulatory network in OsRpp30-mediated disease resistance in rice.

Li M, Li W, Zhao M, Li Z, Wang GL, Liu W, Liang C. Li M, et al. Among authors: liang c. BMC Genomics. 2023 Oct 26;24(1):643. doi: 10.1186/s12864-023-09748-w. BMC Genomics. 2023. PMID: 37884868 Free PMC article.

8

Expressed sequence tags with cDNA termini: previously overlooked resources for gene annotation and transcriptome exploration in Chlamydomonas reinhardtii.

Liang C, Liu Y, Liu L, Davis AC, Shen Y, Li QQ. Liang C, et al. Genetics. 2008 May;179(1):83-93. doi: 10.1534/genetics.107.085605. Genetics. 2008. PMID: 18493042 Free PMC article.

9

Unique features of nuclear mRNA poly(A) signals and alternative polyadenylation in Chlamydomonas reinhardtii.

Shen Y, Liu Y, Liu L, Liang C, Li QQ. Shen Y, et al. Among authors: liang c. Genetics. 2008 May;179(1):167-76. doi: 10.1534/genetics.108.088971. Genetics. 2008. PMID: 18493049 Free PMC article.

10

Comparative analyses between retained introns and constitutively spliced introns in Arabidopsis thaliana using random forest and support vector machine.

Mao R, Raj Kumar PK, Guo C, Zhang Y, Liang C. Mao R, et al. Among authors: liang c. PLoS One. 2014 Aug 11;9(8):e104049. doi: 10.1371/journal.pone.0104049. eCollection 2014. PLoS One. 2014. PMID: 25110928 Free PMC article.

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