van Dijk ADJ - Search Results

1

Meiotic recombination profiling of interspecific hybrid F1 tomato pollen by linked read sequencing.

Rommel Fuentes R, Hesselink T, Nieuwenhuis R, Bakker L, Schijlen E, van Dooijeweert W, Diaz Trivino S, de Haan JR, Sanchez Perez G, Zhang X, Fransz P, de Jong H, van Dijk ADJ, de Ridder D, Peters SA. Rommel Fuentes R, et al. Among authors: van dooijeweert w, van dijk adj. Plant J. 2020 May;102(3):480-492. doi: 10.1111/tpj.14640. Epub 2020 Jan 22. Plant J. 2020. PMID: 31820490 Free article.

2

Prioritization of candidate genes in QTL regions based on associations between traits and biological processes.

Bargsten JW, Nap JP, Sanchez-Perez GF, van Dijk AD. Bargsten JW, et al. BMC Plant Biol. 2014 Dec 10;14:330. doi: 10.1186/s12870-014-0330-3. BMC Plant Biol. 2014. PMID: 25492368 Free PMC article.

3

A quantitative and dynamic model of the Arabidopsis flowering time gene regulatory network.

Leal Valentim F, Mourik Sv, Posé D, Kim MC, Schmid M, van Ham RC, Busscher M, Sanchez-Perez GF, Molenaar J, Angenent GC, Immink RG, van Dijk AD. Leal Valentim F, et al. PLoS One. 2015 Feb 26;10(2):e0116973. doi: 10.1371/journal.pone.0116973. eCollection 2015. PLoS One. 2015. PMID: 25719734 Free PMC article.

4

Distribution, position and genomic characteristics of crossovers in tomato recombinant inbred lines derived from an interspecific cross between Solanum lycopersicum and Solanum pimpinellifolium.

Demirci S, van Dijk AD, Sanchez Perez G, Aflitos SA, de Ridder D, Peters SA. Demirci S, et al. Plant J. 2017 Feb;89(3):554-564. doi: 10.1111/tpj.13406. Epub 2017 Feb 3. Plant J. 2017. PMID: 27797425 Free article.

5

Selected proceedings of Machine Learning in Systems Biology: MLSB 2016.

van Dijk AD, Lähdesmäki H, de Ridder D, Rousu J. van Dijk AD, et al. BMC Bioinformatics. 2016 Dec 13;17(Suppl 16):437. doi: 10.1186/s12859-016-1305-1. BMC Bioinformatics. 2016. PMID: 28105910 Free PMC article. No abstract available.

6

Sequence-based analysis of protein degradation rates.

Correa Marrero M, van Dijk ADJ, de Ridder D. Correa Marrero M, et al. Among authors: van dijk adj. Proteins. 2017 Sep;85(9):1593-1601. doi: 10.1002/prot.25323. Epub 2017 Jun 10. Proteins. 2017. PMID: 28547871

7

Similarities between plant traits based on their connection to underlying gene functions.

Nap JP, Sanchez-Perez GF, van Dijk ADJ. Nap JP, et al. Among authors: van dijk adj. PLoS One. 2017 Aug 10;12(8):e0182097. doi: 10.1371/journal.pone.0182097. eCollection 2017. PLoS One. 2017. PMID: 28797052 Free PMC article.

8

Transcription Factor-Mediated Control of Anthocyanin Biosynthesis in Vegetative Tissues.

Outchkourov NS, Karlova R, Hölscher M, Schrama X, Blilou I, Jongedijk E, Simon CD, van Dijk ADJ, Bosch D, Hall RD, Beekwilder J. Outchkourov NS, et al. Among authors: van dijk adj. Plant Physiol. 2018 Feb;176(2):1862-1878. doi: 10.1104/pp.17.01662. Epub 2017 Nov 30. Plant Physiol. 2018. PMID: 29192027 Free PMC article.

9

DNA sequence and shape are predictive for meiotic crossovers throughout the plant kingdom.

Demirci S, Peters SA, de Ridder D, van Dijk ADJ. Demirci S, et al. Among authors: van dijk adj. Plant J. 2018 May 29. doi: 10.1111/tpj.13979. Online ahead of print. Plant J. 2018. PMID: 29808512 Free article.

10

Improved inference of intermolecular contacts through protein-protein interaction prediction using coevolutionary analysis.

Correa Marrero M, Immink RGH, de Ridder D, van Dijk ADJ. Correa Marrero M, et al. Among authors: van dijk adj. Bioinformatics. 2019 Jun 1;35(12):2036-2042. doi: 10.1093/bioinformatics/bty924. Bioinformatics. 2019. PMID: 30398547

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