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The OPEP protein model: from single molecules, amyloid formation, crowding and hydrodynamics to DNA/RNA systems.
Sterpone F, Melchionna S, Tuffery P, Pasquali S, Mousseau N, Cragnolini T, Chebaro Y, St-Pierre JF, Kalimeri M, Barducci A, Laurin Y, Tek A, Baaden M, Nguyen PH, Derreumaux P. Sterpone F, et al. Among authors: derreumaux p. Chem Soc Rev. 2014 Jul 7;43(13):4871-93. doi: 10.1039/c4cs00048j. Epub 2014 Apr 23. Chem Soc Rev. 2014. PMID: 24759934 Free PMC article. Review.
Epock: rapid analysis of protein pocket dynamics.
Laurent B, Chavent M, Cragnolini T, Dahl AC, Pasquali S, Derreumaux P, Sansom MS, Baaden M. Laurent B, et al. Among authors: derreumaux p. Bioinformatics. 2015 May 1;31(9):1478-80. doi: 10.1093/bioinformatics/btu822. Epub 2014 Dec 12. Bioinformatics. 2015. PMID: 25505095 Free PMC article.
Amyloid β Protein and Alzheimer's Disease: When Computer Simulations Complement Experimental Studies.
Nasica-Labouze J, Nguyen PH, Sterpone F, Berthoumieu O, Buchete NV, Coté S, De Simone A, Doig AJ, Faller P, Garcia A, Laio A, Li MS, Melchionna S, Mousseau N, Mu Y, Paravastu A, Pasquali S, Rosenman DJ, Strodel B, Tarus B, Viles JH, Zhang T, Wang C, Derreumaux P. Nasica-Labouze J, et al. Among authors: derreumaux p. Chem Rev. 2015 May 13;115(9):3518-63. doi: 10.1021/cr500638n. Epub 2015 Mar 19. Chem Rev. 2015. PMID: 25789869 Free PMC article. Review.
Multiscale simulation of molecular processes in cellular environments.
Chiricotto M, Sterpone F, Derreumaux P, Melchionna S. Chiricotto M, et al. Among authors: derreumaux p. Philos Trans A Math Phys Eng Sci. 2016 Nov 13;374(2080):20160225. doi: 10.1098/rsta.2016.0225. Philos Trans A Math Phys Eng Sci. 2016. PMID: 27698046 Free PMC article. Review.
182 results