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INKA, an integrative data analysis pipeline for phosphoproteomic inference of active kinases.
Beekhof R, van Alphen C, Henneman AA, Knol JC, Pham TV, Rolfs F, Labots M, Henneberry E, Le Large TY, de Haas RR, Piersma SR, Vurchio V, Bertotti A, Trusolino L, Verheul HM, Jimenez CR. Beekhof R, et al. Among authors: piersma sr. Mol Syst Biol. 2019 May 24;15(5):e8981. doi: 10.15252/msb.20198981. Mol Syst Biol. 2019. PMID: 31126969 Free PMC article.
Proteomics of the TRAP-induced platelet releasate.
Piersma SR, Broxterman HJ, Kapci M, de Haas RR, Hoekman K, Verheul HM, Jiménez CR. Piersma SR, et al. J Proteomics. 2009 Feb 15;72(1):91-109. doi: 10.1016/j.jprot.2008.10.009. Epub 2008 Nov 8. J Proteomics. 2009. PMID: 19049909
Subnuclear proteomics in colorectal cancer: identification of proteins enriched in the nuclear matrix fraction and regulation in adenoma to carcinoma progression.
Albrethsen J, Knol JC, Piersma SR, Pham TV, de Wit M, Mongera S, Carvalho B, Verheul HM, Fijneman RJ, Meijer GA, Jimenez CR. Albrethsen J, et al. Among authors: piersma sr. Mol Cell Proteomics. 2010 May;9(5):988-1005. doi: 10.1074/mcp.M900546-MCP200. Epub 2010 Jan 20. Mol Cell Proteomics. 2010. PMID: 20089989 Free PMC article.
Proteomics of genetically engineered mouse mammary tumors identifies fatty acid metabolism members as potential predictive markers for cisplatin resistance.
Warmoes M, Jaspers JE, Xu G, Sampadi BK, Pham TV, Knol JC, Piersma SR, Boven E, Jonkers J, Rottenberg S, Jimenez CR. Warmoes M, et al. Among authors: piersma sr. Mol Cell Proteomics. 2013 May;12(5):1319-34. doi: 10.1074/mcp.M112.024182. Epub 2013 Feb 8. Mol Cell Proteomics. 2013. PMID: 23397111 Free PMC article.
165 results