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Isolation and characterization of Streptomyces bacteriophages and Streptomyces strains encoding biosynthetic arsenals.
Montaño ET, Nideffer JF, Brumage L, Erb M, Busch J, Fernandez L, Derman AI, Davis JP, Estrada E, Fu S, Le D, Vuppala A, Tran C, Luterstein E, Lakkaraju S, Panchagnula S, Ren C, Doan J, Tran S, Soriano J, Fujita Y, Gutala P, Fujii Q, Lee M, Bui A, Villarreal C, Shing SR, Kim S, Freeman D, Racha V, Ho A, Kumar P, Falah K, Dawson T, Enustun E, Prichard A, Gomez A, Khanna K, Trigg S, Pogliano K, Pogliano J. Montaño ET, et al. Among authors: lakkaraju s. PLoS One. 2022 Jan 21;17(1):e0262354. doi: 10.1371/journal.pone.0262354. eCollection 2022. PLoS One. 2022. PMID: 35061755 Free PMC article.
Collaborative Assessment of Molecular Geometries and Energies from the Open Force Field.
D'Amore L, Hahn DF, Dotson DL, Horton JT, Anwar J, Craig I, Fox T, Gobbi A, Lakkaraju SK, Lucas X, Meier K, Mobley DL, Narayanan A, Schindler CEM, Swope WC, In 't Veld PJ, Wagner J, Xue B, Tresadern G. D'Amore L, et al. Among authors: lakkaraju sk. J Chem Inf Model. 2022 Dec 12;62(23):6094-6104. doi: 10.1021/acs.jcim.2c01185. Epub 2022 Nov 26. J Chem Inf Model. 2022. PMID: 36433835 Free PMC article.
Structure of the human marker of self 5-transmembrane receptor CD47.
Fenalti G, Villanueva N, Griffith M, Pagarigan B, Lakkaraju SK, Huang RY, Ladygina N, Sharma A, Mikolon D, Abbasian M, Johnson J, Hadjivassiliou H, Zhu D, Chamberlain PP, Cho H, Hariharan K. Fenalti G, et al. Among authors: lakkaraju sk. Nat Commun. 2021 Sep 1;12(1):5218. doi: 10.1038/s41467-021-25475-w. Nat Commun. 2021. PMID: 34471125 Free PMC article.
Insights into Glucose-6-phosphate Allosteric Activation of β-Glucosidase A.
A Gomes A, da Silva GF, Lakkaraju SK, Guimarães BG, MacKerell AD Jr, Magalhães MLB. A Gomes A, et al. Among authors: lakkaraju sk. J Chem Inf Model. 2021 Apr 26;61(4):1931-1941. doi: 10.1021/acs.jcim.0c01450. Epub 2021 Apr 5. J Chem Inf Model. 2021. PMID: 33819021 Free PMC article.
Identification and characterization of fragment binding sites for allosteric ligand design using the site identification by ligand competitive saturation hotspots approach (SILCS-Hotspots).
MacKerell AD Jr, Jo S, Lakkaraju SK, Lind C, Yu W. MacKerell AD Jr, et al. Among authors: lakkaraju sk. Biochim Biophys Acta Gen Subj. 2020 Apr;1864(4):129519. doi: 10.1016/j.bbagen.2020.129519. Epub 2020 Jan 3. Biochim Biophys Acta Gen Subj. 2020. PMID: 31911242 Free PMC article.
29 results