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Page 1
A Guide to Dictionary-Based Text Mining.
Cook HV, Jensen LJ. Cook HV, et al. Among authors: jensen lj. Methods Mol Biol. 2019;1939:73-89. doi: 10.1007/978-1-4939-9089-4_5. Methods Mol Biol. 2019. PMID: 30848457
ENVIRONMENTS and EOL: identification of Environment Ontology terms in text and the annotation of the Encyclopedia of Life.
Pafilis E, Frankild SP, Schnetzer J, Fanini L, Faulwetter S, Pavloudi C, Vasileiadou K, Leary P, Hammock J, Schulz K, Parr CS, Arvanitidis C, Jensen LJ. Pafilis E, et al. Among authors: jensen lj. Bioinformatics. 2015 Jun 1;31(11):1872-4. doi: 10.1093/bioinformatics/btv045. Epub 2015 Jan 24. Bioinformatics. 2015. PMID: 25619994 Free PMC article.
Protein-protein interaction databases.
Szklarczyk D, Jensen LJ. Szklarczyk D, et al. Among authors: jensen lj. Methods Mol Biol. 2015;1278:39-56. doi: 10.1007/978-1-4939-2425-7_3. Methods Mol Biol. 2015. PMID: 25859942
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences.
Huerta-Cepas J, Szklarczyk D, Forslund K, Cook H, Heller D, Walter MC, Rattei T, Mende DR, Sunagawa S, Kuhn M, Jensen LJ, von Mering C, Bork P. Huerta-Cepas J, et al. Among authors: jensen lj. Nucleic Acids Res. 2016 Jan 4;44(D1):D286-93. doi: 10.1093/nar/gkv1248. Epub 2015 Nov 17. Nucleic Acids Res. 2016. PMID: 26582926 Free PMC article.
From Phosphosites to Kinases.
Munk S, Refsgaard JC, Olsen JV, Jensen LJ. Munk S, et al. Among authors: jensen lj. Methods Mol Biol. 2016;1355:307-21. doi: 10.1007/978-1-4939-3049-4_21. Methods Mol Biol. 2016. PMID: 26584935 Review.
miRandola 2017: a curated knowledge base of non-invasive biomarkers.
Russo F, Di Bella S, Vannini F, Berti G, Scoyni F, Cook HV, Santos A, Nigita G, Bonnici V, Laganà A, Geraci F, Pulvirenti A, Giugno R, De Masi F, Belling K, Jensen LJ, Brunak S, Pellegrini M, Ferro A. Russo F, et al. Among authors: jensen lj. Nucleic Acids Res. 2018 Jan 4;46(D1):D354-D359. doi: 10.1093/nar/gkx854. Nucleic Acids Res. 2018. PMID: 29036351 Free PMC article.
301 results