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A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants.
Pilkington SM, Crowhurst R, Hilario E, Nardozza S, Fraser L, Peng Y, Gunaseelan K, Simpson R, Tahir J, Deroles SC, Templeton K, Luo Z, Davy M, Cheng C, McNeilage M, Scaglione D, Liu Y, Zhang Q, Datson P, De Silva N, Gardiner SE, Bassett H, Chagné D, McCallum J, Dzierzon H, Deng C, Wang YY, Barron L, Manako K, Bowen J, Foster TM, Erridge ZA, Tiffin H, Waite CN, Davies KM, Grierson EP, Laing WA, Kirk R, Chen X, Wood M, Montefiori M, Brummell DA, Schwinn KE, Catanach A, Fullerton C, Li D, Meiyalaghan S, Nieuwenhuizen N, Read N, Prakash R, Hunter D, Zhang H, McKenzie M, Knäbel M, Harris A, Allan AC, Gleave A, Chen A, Janssen BJ, Plunkett B, Ampomah-Dwamena C, Voogd C, Leif D, Lafferty D, Souleyre EJF, Varkonyi-Gasic E, Gambi F, Hanley J, Yao JL, Cheung J, David KM, Warren B, Marsh K, Snowden KC, Lin-Wang K, Brian L, Martinez-Sanchez M, Wang M, Ileperuma N, Macnee N, Campin R, McAtee P, Drummond RSM, Espley RV, Ireland HS, Wu R, Atkinson RG, Karunairetnam S, Bulley S, Chunkath S, Hanley Z, Storey R, Thrimawithana AH, Thomson S, David C, Testolin R, Huang H, Hellens RP, Schaffer RJ. Pilkington SM, et al. Among authors: mccallum j. BMC Genomics. 2018 Apr 16;19(1):257. doi: 10.1186/s12864-018-4656-3. BMC Genomics. 2018. PMID: 29661190 Free PMC article.
Genetic analyses of bolting in bulb onion (Allium cepa L.).
Baldwin S, Revanna R, Pither-Joyce M, Shaw M, Wright K, Thomson S, Moya L, Lee R, Macknight R, McCallum J. Baldwin S, et al. Among authors: mccallum j. Theor Appl Genet. 2014 Mar;127(3):535-47. doi: 10.1007/s00122-013-2232-4. Epub 2013 Nov 19. Theor Appl Genet. 2014. PMID: 24247236
Genetic and cytological analyses reveal the recombination landscape of a partially differentiated plant sex chromosome in kiwifruit.
Pilkington SM, Tahir J, Hilario E, Gardiner SE, Chagné D, Catanach A, McCallum J, Jesson L, Fraser LG, McNeilage MA, Deng C, Crowhurst RN, Datson PM, Zhang Q. Pilkington SM, et al. Among authors: mccallum j. BMC Plant Biol. 2019 Apr 30;19(1):172. doi: 10.1186/s12870-019-1766-2. BMC Plant Biol. 2019. PMID: 31039740 Free PMC article.
Multiple quantitative trait loci contribute to resistance to bacterial canker incited by Pseudomonas syringae pv. actinidiae in kiwifruit (Actinidia chinensis).
Tahir J, Hoyte S, Bassett H, Brendolise C, Chatterjee A, Templeton K, Deng C, Crowhurst R, Montefiori M, Morgan E, Wotton A, Funnell K, Wiedow C, Knaebel M, Hedderley D, Vanneste J, McCallum J, Hoeata K, Nath A, Chagné D, Gea L, Gardiner SE. Tahir J, et al. Among authors: mccallum j. Hortic Res. 2019 Sep 1;6:101. doi: 10.1038/s41438-019-0184-9. eCollection 2019. Hortic Res. 2019. PMID: 31645956 Free PMC article.
QTL Mapping for Resistance to Cankers Induced by Pseudomonas syringae pv. actinidiae (Psa) in a Tetraploid Actinidia chinensis Kiwifruit Population.
Tahir J, Brendolise C, Hoyte S, Lucas M, Thomson S, Hoeata K, McKenzie C, Wotton A, Funnell K, Morgan E, Hedderley D, Chagné D, Bourke PM, McCallum J, Gardiner SE, Gea L. Tahir J, et al. Among authors: mccallum j. Pathogens. 2020 Nov 20;9(11):967. doi: 10.3390/pathogens9110967. Pathogens. 2020. PMID: 33233616 Free PMC article.
441 results