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Large-Scale Complete-Genome Sequencing and Phylodynamic Analysis of Eastern Equine Encephalitis Virus Reveals Source-Sink Transmission Dynamics in the United States.
Tan Y, Lam TT, Heberlein-Larson LA, Smole SC, Auguste AJ, Hennigan S, Halpin RA, Fedorova N, Puri V, Stockwell TB, Shilts MH, Andreadis T, Armstrong PM, Tesh RB, Weaver SC, Unnasch TR, Ciota AT, Kramer LD, Das SR. Tan Y, et al. J Virol. 2018 May 29;92(12):e00074-18. doi: 10.1128/JVI.00074-18. Print 2018 Jun 15. J Virol. 2018. PMID: 29618651 Free PMC article.
Differing epidemiological dynamics of Chikungunya virus in the Americas during the 2014-2015 epidemic.
Tan Y, Pickett BE, Shrivastava S, Gresh L, Balmaseda A, Amedeo P, Hu L, Puri V, Fedorova NB, Halpin RA, LaPointe MP, Cone MR, Heberlein-Larson L, Kramer LD, Ciota AT, Gordon A, Shabman RS, Das SR, Harris E. Tan Y, et al. PLoS Negl Trop Dis. 2018 Jul 30;12(7):e0006670. doi: 10.1371/journal.pntd.0006670. eCollection 2018 Jul. PLoS Negl Trop Dis. 2018. PMID: 30059496 Free PMC article.
Multiple Introductions and Antigenic Mismatch with Vaccines May Contribute to Increased Predominance of G12P[8] Rotaviruses in the United States.
Ogden KM, Tan Y, Akopov A, Stewart LS, McHenry R, Fonnesbeck CJ, Piya B, Carter MH, Fedorova NB, Halpin RA, Shilts MH, Edwards KM, Payne DC, Esona MD, Mijatovic-Rustempasic S, Chappell JD, Patton JT, Halasa NB, Das SR. Ogden KM, et al. Among authors: tan y. J Virol. 2018 Dec 10;93(1):e01476-18. doi: 10.1128/JVI.01476-18. Print 2019 Jan 1. J Virol. 2018. PMID: 30333170 Free PMC article.
Whole-genome sequencing and analyses identify high genetic heterogeneity, diversity and endemicity of rotavirus genotype P[6] strains circulating in Africa.
Nyaga MM, Tan Y, Seheri ML, Halpin RA, Akopov A, Stucker KM, Fedorova NB, Shrivastava S, Duncan Steele A, Mwenda JM, Pickett BE, Das SR, Jeffrey Mphahlele M. Nyaga MM, et al. Among authors: tan y. Infect Genet Evol. 2018 Sep;63:79-88. doi: 10.1016/j.meegid.2018.05.013. Epub 2018 May 18. Infect Genet Evol. 2018. PMID: 29782933 Free PMC article.
Spatial and temporal expansions of Eastern equine encephalitis virus and phylogenetic groups isolated from mosquitoes and mammalian cases in New York State from 2013 to 2019.
Oliver J, Tan Y, Haight JD, Tober KJ, Gall WK, Zink SD, Kramer LD, Campbell SR, Howard JJ, Das SR, Sherwood JA. Oliver J, et al. Among authors: tan y. Emerg Microbes Infect. 2020 Dec;9(1):1638-1650. doi: 10.1080/22221751.2020.1774426. Emerg Microbes Infect. 2020. PMID: 32672516 Free PMC article.
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