Alvarez B - Search Results

1

Computational Tools for the Identification and Interpretation of Sequence Motifs in Immunopeptidomes.

Alvarez B, Barra C, Nielsen M, Andreatta M. Alvarez B, et al. Proteomics. 2018 Jun;18(12):e1700252. doi: 10.1002/pmic.201700252. Epub 2018 Feb 26. Proteomics. 2018. PMID: 29327813 Free PMC article. Review.

2

Footprints of antigen processing boost MHC class II natural ligand predictions.

Barra C, Alvarez B, Paul S, Sette A, Peters B, Andreatta M, Buus S, Nielsen M. Barra C, et al. Among authors: alvarez b. Genome Med. 2018 Nov 16;10(1):84. doi: 10.1186/s13073-018-0594-6. Genome Med. 2018. PMID: 30446001 Free PMC article.

3

NNAlign_MA; MHC Peptidome Deconvolution for Accurate MHC Binding Motif Characterization and Improved T-cell Epitope Predictions.

Alvarez B, Reynisson B, Barra C, Buus S, Ternette N, Connelley T, Andreatta M, Nielsen M. Alvarez B, et al. Mol Cell Proteomics. 2019 Dec;18(12):2459-2477. doi: 10.1074/mcp.TIR119.001658. Epub 2019 Oct 2. Mol Cell Proteomics. 2019. PMID: 31578220 Free PMC article.

4

Accurate MHC Motif Deconvolution of Immunopeptidomics Data Reveals a Significant Contribution of DRB3, 4 and 5 to the Total DR Immunopeptidome.

Kaabinejadian S, Barra C, Alvarez B, Yari H, Hildebrand WH, Nielsen M. Kaabinejadian S, et al. Among authors: alvarez b. Front Immunol. 2022 Jan 26;13:835454. doi: 10.3389/fimmu.2022.835454. eCollection 2022. Front Immunol. 2022. PMID: 35154160 Free PMC article.

5

GibbsCluster: unsupervised clustering and alignment of peptide sequences.

Andreatta M, Alvarez B, Nielsen M. Andreatta M, et al. Among authors: alvarez b. Nucleic Acids Res. 2017 Jul 3;45(W1):W458-W463. doi: 10.1093/nar/gkx248. Nucleic Acids Res. 2017. PMID: 28407089 Free PMC article.

6

NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data.

Reynisson B, Alvarez B, Paul S, Peters B, Nielsen M. Reynisson B, et al. Among authors: alvarez b. Nucleic Acids Res. 2020 Jul 2;48(W1):W449-W454. doi: 10.1093/nar/gkaa379. Nucleic Acids Res. 2020. PMID: 32406916 Free PMC article.

7

[No title available]

[No authors listed] [No authors listed] PMID: 33451461

8

Joint Recommendations From The Latin American Association of Cardiac and Endovascular Surgery (LACES) and The Cardiovascular Anesthesia Committee of The Latin American Confederation of Anesthesia Societies (CLASA) on the Timing for Cardiac Surgery After COVID-19 Infection.

Dayan V, Straneo P, Arguello MJ, Vaca M, Enriquez LE, Krogh G, Humani CAC, Iza MPC, Fernandez EL, Roque RR, Pinto XM, Figueroa RA, Heilbron OF, Schioppi M, Alvarez BBC, Marin-Cuartas M, Gomes WJ, Riva J. Dayan V, et al. Braz J Cardiovasc Surg. 2022 Oct 8;37(5):754-764. doi: 10.21470/1678-9741-2022-0198. Braz J Cardiovasc Surg. 2022. PMID: 36112743 Free PMC article.

9

The monodomain Kunitz protein EgKU-7 from Echinococcus granulosus, the dog tapeworm, is a high-affinity trypsin inhibitor with two interaction sites.

Fló Díaz M, Pellizza L, Duran R, Alvarez B, Fernández C. Fló Díaz M, et al. Among authors: alvarez b. Biochem J. 2024 May 16:BCJ20230514. doi: 10.1042/BCJ20230514. Online ahead of print. Biochem J. 2024. PMID: 38752933

10

Real-world efficacy of postoperative radiotherapy with a moderate dose-escalation for phyllodes tumors of the breast.

Álvarez B, Montero A, Ciérvide R, García-Aranda M, Valero J, Chen-Zhao X, López M, Alonso R, García J, Hernando O, Sánchez E, de la Casa MA, Fernandez-Letón P, Rubio C. Álvarez B, et al. Transl Breast Cancer Res. 2023 Jul 30;4:19. doi: 10.21037/tbcr-23-37. eCollection 2023. Transl Breast Cancer Res. 2023. PMID: 38751466 Free PMC article.

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