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Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data.
PLoS Biol. 2017 Jun 29;15(6):e2001414. doi: 10.1371/journal.pbio.2001414. eCollection 2017 Jun.
PLoS Biol. 2017.
PMID: 28662064
Free PMC article.
The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud.
Wolstencroft K, Haines R, Fellows D, Williams A, Withers D, Owen S, Soiland-Reyes S, Dunlop I, Nenadic A, Fisher P, Bhagat J, Belhajjame K, Bacall F, Hardisty A, Nieva de la Hidalga A, Balcazar Vargas MP, Sufi S, Goble C.
Wolstencroft K, et al.
Nucleic Acids Res. 2013 Jul;41(Web Server issue):W557-61. doi: 10.1093/nar/gkt328. Epub 2013 May 2.
Nucleic Acids Res. 2013.
PMID: 23640334
Free PMC article.
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An automated Design-Build-Test-Learn pipeline for enhanced microbial production of fine chemicals.
Carbonell P, Jervis AJ, Robinson CJ, Yan C, Dunstan M, Swainston N, Vinaixa M, Hollywood KA, Currin A, Rattray NJW, Taylor S, Spiess R, Sung R, Williams AR, Fellows D, Stanford NJ, Mulherin P, Le Feuvre R, Barran P, Goodacre R, Turner NJ, Goble C, Chen GG, Kell DB, Micklefield J, Breitling R, Takano E, Faulon JL, Scrutton NS.
Carbonell P, et al.
Commun Biol. 2018 Jun 8;1:66. doi: 10.1038/s42003-018-0076-9. eCollection 2018.
Commun Biol. 2018.
PMID: 30271948
Free PMC article.
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SYNBIOCHEM-a SynBio foundry for the biosynthesis and sustainable production of fine and speciality chemicals.
Carbonell P, Currin A, Dunstan M, Fellows D, Jervis A, Rattray NJ, Robinson CJ, Swainston N, Vinaixa M, Williams A, Yan C, Barran P, Breitling R, Chen GG, Faulon JL, Goble C, Goodacre R, Kell DB, Feuvre RL, Micklefield J, Scrutton NS, Shapira P, Takano E, Turner NJ.
Carbonell P, et al.
Biochem Soc Trans. 2016 Jun 15;44(3):675-7. doi: 10.1042/BST20160009.
Biochem Soc Trans. 2016.
PMID: 27284023
Free PMC article.
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BioVeL: a virtual laboratory for data analysis and modelling in biodiversity science and ecology.
Hardisty AR, Bacall F, Beard N, Balcázar-Vargas MP, Balech B, Barcza Z, Bourlat SJ, De Giovanni R, de Jong Y, De Leo F, Dobor L, Donvito G, Fellows D, Guerra AF, Ferreira N, Fetyukova Y, Fosso B, Giddy J, Goble C, Güntsch A, Haines R, Ernst VH, Hettling H, Hidy D, Horváth F, Ittzés D, Ittzés P, Jones A, Kottmann R, Kulawik R, Leidenberger S, Lyytikäinen-Saarenmaa P, Mathew C, Morrison N, Nenadic A, de la Hidalga AN, Obst M, Oostermeijer G, Paymal E, Pesole G, Pinto S, Poigné A, Fernandez FQ, Santamaria M, Saarenmaa H, Sipos G, Sylla KH, Tähtinen M, Vicario S, Vos RA, Williams AR, Yilmaz P.
Hardisty AR, et al.
BMC Ecol. 2016 Oct 20;16(1):49. doi: 10.1186/s12898-016-0103-y.
BMC Ecol. 2016.
PMID: 27765035
Free PMC article.
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sPyNNaker: A Software Package for Running PyNN Simulations on SpiNNaker.
Rhodes O, Bogdan PA, Brenninkmeijer C, Davidson S, Fellows D, Gait A, Lester DR, Mikaitis M, Plana LA, Rowley AGD, Stokes AB, Furber SB.
Rhodes O, et al.
Front Neurosci. 2018 Nov 20;12:816. doi: 10.3389/fnins.2018.00816. eCollection 2018.
Front Neurosci. 2018.
PMID: 30524220
Free PMC article.
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SpiNNTools: The Execution Engine for the SpiNNaker Platform.
Rowley AGD, Brenninkmeijer C, Davidson S, Fellows D, Gait A, Lester DR, Plana LA, Rhodes O, Stokes AB, Furber SB.
Rowley AGD, et al.
Front Neurosci. 2019 Mar 26;13:231. doi: 10.3389/fnins.2019.00231. eCollection 2019.
Front Neurosci. 2019.
PMID: 30971873
Free PMC article.
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