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BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.
Gorgolewski KJ, Alfaro-Almagro F, Auer T, Bellec P, Capotă M, Chakravarty MM, Churchill NW, Cohen AL, Craddock RC, Devenyi GA, Eklund A, Esteban O, Flandin G, Ghosh SS, Guntupalli JS, Jenkinson M, Keshavan A, Kiar G, Liem F, Raamana PR, Raffelt D, Steele CJ, Quirion PO, Smith RE, Strother SC, Varoquaux G, Wang Y, Yarkoni T, Poldrack RA. Gorgolewski KJ, et al. Among authors: jenkinson m. PLoS Comput Biol. 2017 Mar 9;13(3):e1005209. doi: 10.1371/journal.pcbi.1005209. eCollection 2017 Mar. PLoS Comput Biol. 2017. PMID: 28278228 Free PMC article.
Bayesian analysis of neuroimaging data in FSL.
Woolrich MW, Jbabdi S, Patenaude B, Chappell M, Makni S, Behrens T, Beckmann C, Jenkinson M, Smith SM. Woolrich MW, et al. Among authors: jenkinson m. Neuroimage. 2009 Mar;45(1 Suppl):S173-86. doi: 10.1016/j.neuroimage.2008.10.055. Epub 2008 Nov 13. Neuroimage. 2009. PMID: 19059349
Sharing brain mapping statistical results with the neuroimaging data model.
Maumet C, Auer T, Bowring A, Chen G, Das S, Flandin G, Ghosh S, Glatard T, Gorgolewski KJ, Helmer KG, Jenkinson M, Keator DB, Nichols BN, Poline JB, Reynolds R, Sochat V, Turner J, Nichols TE. Maumet C, et al. Among authors: jenkinson m. Sci Data. 2016 Dec 6;3:160102. doi: 10.1038/sdata.2016.102. Sci Data. 2016. PMID: 27922621 Free PMC article.
Image processing and Quality Control for the first 10,000 brain imaging datasets from UK Biobank.
Alfaro-Almagro F, Jenkinson M, Bangerter NK, Andersson JLR, Griffanti L, Douaud G, Sotiropoulos SN, Jbabdi S, Hernandez-Fernandez M, Vallee E, Vidaurre D, Webster M, McCarthy P, Rorden C, Daducci A, Alexander DC, Zhang H, Dragonu I, Matthews PM, Miller KL, Smith SM. Alfaro-Almagro F, et al. Among authors: jenkinson m. Neuroimage. 2018 Feb 1;166:400-424. doi: 10.1016/j.neuroimage.2017.10.034. Epub 2017 Oct 24. Neuroimage. 2018. PMID: 29079522 Free PMC article.
Tract-based spatial statistics: voxelwise analysis of multi-subject diffusion data.
Smith SM, Jenkinson M, Johansen-Berg H, Rueckert D, Nichols TE, Mackay CE, Watkins KE, Ciccarelli O, Cader MZ, Matthews PM, Behrens TE. Smith SM, et al. Among authors: jenkinson m. Neuroimage. 2006 Jul 15;31(4):1487-505. doi: 10.1016/j.neuroimage.2006.02.024. Epub 2006 Apr 19. Neuroimage. 2006. PMID: 16624579
480 results