Escudié F - Search Results

1

Compacting and correcting Trinity and Oases RNA-Seq de novo assemblies.

Cabau C, Escudié F, Djari A, Guiguen Y, Bobe J, Klopp C. Cabau C, et al. Among authors: escudie f. PeerJ. 2017 Feb 16;5:e2988. doi: 10.7717/peerj.2988. eCollection 2017. PeerJ. 2017. PMID: 28224052 Free PMC article.

2

jvenn: an interactive Venn diagram viewer.

Bardou P, Mariette J, Escudié F, Djemiel C, Klopp C. Bardou P, et al. Among authors: escudie f. BMC Bioinformatics. 2014 Aug 29;15(1):293. doi: 10.1186/1471-2105-15-293. BMC Bioinformatics. 2014. PMID: 25176396 Free PMC article.

3

Genome-Wide Study of Structural Variants in Bovine Holstein, Montbéliarde and Normande Dairy Breeds.

Boussaha M, Esquerré D, Barbieri J, Djari A, Pinton A, Letaief R, Salin G, Escudié F, Roulet A, Fritz S, Samson F, Grohs C, Bernard M, Klopp C, Boichard D, Rocha D. Boussaha M, et al. Among authors: escudie f. PLoS One. 2015 Aug 28;10(8):e0135931. doi: 10.1371/journal.pone.0135931. eCollection 2015. PLoS One. 2015. PMID: 26317361 Free PMC article.

4

Jflow: a workflow management system for web applications.

Mariette J, Escudié F, Bardou P, Nabihoudine I, Noirot C, Trotard MS, Gaspin C, Klopp C. Mariette J, et al. Among authors: escudie f. Bioinformatics. 2016 Feb 1;32(3):456-8. doi: 10.1093/bioinformatics/btv589. Epub 2015 Oct 10. Bioinformatics. 2016. PMID: 26454273 Free PMC article.

5

NG6: Integrated next generation sequencing storage and processing environment.

Mariette J, Escudié F, Allias N, Salin G, Noirot C, Thomas S, Klopp C. Mariette J, et al. Among authors: escudie f. BMC Genomics. 2012 Sep 9;13:462. doi: 10.1186/1471-2164-13-462. BMC Genomics. 2012. PMID: 22958229 Free PMC article.

6

Root transcriptomic responses of grafted grapevines to heterogeneous nitrogen availability depend on rootstock genotype.

Cochetel N, Escudié F, Cookson SJ, Dai Z, Vivin P, Bert PF, Muñoz MS, Delrot S, Klopp C, Ollat N, Lauvergeat V. Cochetel N, et al. Among authors: escudie f. J Exp Bot. 2017 Jul 10;68(15):4339-4355. doi: 10.1093/jxb/erx224. J Exp Bot. 2017. PMID: 28922755 Free PMC article.

7

Contrasted effects of natural complex mixtures of PAHs and metals on oxygen cycle in a microbial mat.

Pringault O, Aube J, Bouchez O, Klopp C, Mariette J, Escudie F, Senin P, Goni-Urriza M. Pringault O, et al. Among authors: escudie f. Chemosphere. 2015 Sep;135:189-201. doi: 10.1016/j.chemosphere.2015.04.037. Epub 2015 May 15. Chemosphere. 2015. PMID: 25957138

8

FROGS: Find, Rapidly, OTUs with Galaxy Solution.

Escudié F, Auer L, Bernard M, Mariadassou M, Cauquil L, Vidal K, Maman S, Hernandez-Raquet G, Combes S, Pascal G. Escudié F, et al. Bioinformatics. 2018 Apr 15;34(8):1287-1294. doi: 10.1093/bioinformatics/btx791. Bioinformatics. 2018. PMID: 29228191

9

MIAmS: microsatellite instability detection on NGS amplicons data.

Escudié F, Van Goethem C, Grand D, Vendrell J, Vigier A, Brousset P, Evrard SM, Solassol J, Selves J. Escudié F, et al. Bioinformatics. 2019 Oct 24:btz797. doi: 10.1093/bioinformatics/btz797. Online ahead of print. Bioinformatics. 2019. PMID: 31647522

10

Mitochondrial genomes of the Baltic clam Macoma balthica (Bivalvia: Tellinidae): setting the stage for studying mito-nuclear incompatibilities.

Saunier A, Garcia P, Becquet V, Marsaud N, Escudié F, Pante E. Saunier A, et al. Among authors: escudie f. BMC Evol Biol. 2014 Dec 21;14:259. doi: 10.1186/s12862-014-0259-z. BMC Evol Biol. 2014. PMID: 25527898 Free PMC article.

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