Lund O - Search Results

1

Norwegian patients and retail chicken meat share cephalosporin-resistant Escherichia coli and IncK/bla_CMY-2 resistance plasmids.

Berg ES, Wester AL, Ahrenfeldt J, Mo SS, Slettemeås JS, Steinbakk M, Samuelsen Ø, Grude N, Simonsen GS, Løhr IH, Jørgensen SB, Tofteland S, Lund O, Dahle UR, Sunde M. Berg ES, et al. Among authors: lund o. Clin Microbiol Infect. 2017 Jun;23(6):407.e9-407.e15. doi: 10.1016/j.cmi.2016.12.035. Epub 2017 Jan 7. Clin Microbiol Infect. 2017. PMID: 28082191 Free article.

2

Evaluating next-generation sequencing for direct clinical diagnostics in diarrhoeal disease.

Joensen KG, Engsbro ALØ, Lukjancenko O, Kaas RS, Lund O, Westh H, Aarestrup FM. Joensen KG, et al. Among authors: lund o. Eur J Clin Microbiol Infect Dis. 2017 Jul;36(7):1325-1338. doi: 10.1007/s10096-017-2947-2. Epub 2017 Mar 11. Eur J Clin Microbiol Infect Dis. 2017. PMID: 28285331 Free PMC article.

3

Contaminating viral sequences in high-throughput sequencing viromics: a linkage study of 700 sequencing libraries.

Asplund M, Kjartansdóttir KR, Mollerup S, Vinner L, Fridholm H, Herrera JAR, Friis-Nielsen J, Hansen TA, Jensen RH, Nielsen IB, Richter SR, Rey-Iglesia A, Matey-Hernandez ML, Alquezar-Planas DE, Olsen PVS, Sicheritz-Pontén T, Willerslev E, Lund O, Brunak S, Mourier T, Nielsen LP, Izarzugaza JMG, Hansen AJ. Asplund M, et al. Among authors: lund o. Clin Microbiol Infect. 2019 Oct;25(10):1277-1285. doi: 10.1016/j.cmi.2019.04.028. Epub 2019 May 4. Clin Microbiol Infect. 2019. PMID: 31059795 Free article.

4

Metaphylogenetic analysis of global sewage reveals that bacterial strains associated with human disease show less degree of geographic clustering.

Ahrenfeldt J, Waisi M, Loft IC, Clausen PTLC, Allesøe R, Szarvas J, Hendriksen RS, Aarestrup FM, Lund O. Ahrenfeldt J, et al. Among authors: lund o. Sci Rep. 2020 Feb 20;10(1):3033. doi: 10.1038/s41598-020-59292-w. Sci Rep. 2020. PMID: 32080241 Free PMC article.

5

Large scale automated phylogenomic analysis of bacterial isolates and the Evergreen Online platform.

Szarvas J, Ahrenfeldt J, Cisneros JLB, Thomsen MCF, Aarestrup FM, Lund O. Szarvas J, et al. Among authors: lund o. Commun Biol. 2020 Mar 20;3(1):137. doi: 10.1038/s42003-020-0869-5. Commun Biol. 2020. PMID: 32198478 Free PMC article.

6

In Silico Genotyping of Escherichia coli Isolates for Extraintestinal Virulence Genes by Use of Whole-Genome Sequencing Data.

Malberg Tetzschner AM, Johnson JR, Johnston BD, Lund O, Scheutz F. Malberg Tetzschner AM, et al. Among authors: lund o. J Clin Microbiol. 2020 Sep 22;58(10):e01269-20. doi: 10.1128/JCM.01269-20. Print 2020 Sep 22. J Clin Microbiol. 2020. PMID: 32669379 Free PMC article.

7

Erratum to: Evaluating next-generation sequencing for direct clinical diagnostics in diarrhoeal disease.

Joensen KG, Engsbro ALØ, Lukjancenko O, Kaas RS, Lund O, Westh H, Aarestrup FM. Joensen KG, et al. Among authors: lund o. Eur J Clin Microbiol Infect Dis. 2017 Jul;36(7):1339-1342. doi: 10.1007/s10096-017-2993-9. Eur J Clin Microbiol Infect Dis. 2017. PMID: 28488022 Free PMC article. No abstract available.

8

Understanding and predicting ciprofloxacin minimum inhibitory concentration in Escherichia coli with machine learning.

Pataki BÁ, Matamoros S, van der Putten BCL, Remondini D, Giampieri E, Aytan-Aktug D, Hendriksen RS, Lund O, Csabai I, Schultsz C; SPS COMPARE ML-AMR group. Pataki BÁ, et al. Among authors: lund o. Sci Rep. 2020 Sep 14;10(1):15026. doi: 10.1038/s41598-020-71693-5. Sci Rep. 2020. PMID: 32929164 Free PMC article.

9

Prediction of Acquired Antimicrobial Resistance for Multiple Bacterial Species Using Neural Networks.

Aytan-Aktug D, Clausen PTLC, Bortolaia V, Aarestrup FM, Lund O. Aytan-Aktug D, et al. Among authors: lund o. mSystems. 2020 Jan 21;5(1):e00774-19. doi: 10.1128/mSystems.00774-19. mSystems. 2020. PMID: 31964771 Free PMC article.

10

An interactive database for the investigation of high-density peptide microarray guided interaction patterns and antivenom cross-reactivity.

Krause KE, Jenkins TP, Skaarup C, Engmark M, Casewell NR, Ainsworth S, Lomonte B, Fernández J, Gutiérrez JM, Lund O, Laustsen AH. Krause KE, et al. Among authors: lund o. PLoS Negl Trop Dis. 2020 Jun 24;14(6):e0008366. doi: 10.1371/journal.pntd.0008366. eCollection 2020 Jun. PLoS Negl Trop Dis. 2020. PMID: 32579606 Free PMC article.

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