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The SAMPL5 challenge for embedded-cluster integral equation theory: solvation free energies, aqueous pK a, and cyclohexane-water log D.
J Comput Aided Mol Des. 2016 Nov;30(11):1035-1044. doi: 10.1007/s10822-016-9939-7. Epub 2016 Aug 23.
J Comput Aided Mol Des. 2016.
PMID: 27554666
The SAMPL6 challenge on predicting aqueous pKa values from EC-RISM theory.
Tielker N, Eberlein L, Güssregen S, Kast SM.
Tielker N, et al.
J Comput Aided Mol Des. 2018 Oct;32(10):1151-1163. doi: 10.1007/s10822-018-0140-z. Epub 2018 Aug 2.
J Comput Aided Mol Des. 2018.
PMID: 30073500
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The SAMPL6 challenge on predicting octanol-water partition coefficients from EC-RISM theory.
Tielker N, Tomazic D, Eberlein L, Güssregen S, Kast SM.
Tielker N, et al.
J Comput Aided Mol Des. 2020 Apr;34(4):453-461. doi: 10.1007/s10822-020-00283-4. Epub 2020 Jan 24.
J Comput Aided Mol Des. 2020.
PMID: 31981015
Free PMC article.
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Quantum-mechanical property prediction of solvated drug molecules: what have we learned from a decade of SAMPL blind prediction challenges?
Tielker N, Eberlein L, Hessler G, Schmidt KF, Güssregen S, Kast SM.
Tielker N, et al.
J Comput Aided Mol Des. 2021 Apr;35(4):453-472. doi: 10.1007/s10822-020-00347-5. Epub 2020 Oct 20.
J Comput Aided Mol Des. 2021.
PMID: 33079358
Free PMC article.
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Evaluation of log P, pKa, and log D predictions from the SAMPL7 blind challenge.
Bergazin TD, Tielker N, Zhang Y, Mao J, Gunner MR, Francisco K, Ballatore C, Kast SM, Mobley DL.
Bergazin TD, et al. Among authors: tielker n.
J Comput Aided Mol Des. 2021 Jul;35(7):771-802. doi: 10.1007/s10822-021-00397-3. Epub 2021 Jun 24.
J Comput Aided Mol Des. 2021.
PMID: 34169394
Free PMC article.
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SAMPL7 physical property prediction from EC-RISM theory.
Tielker N, Güssregen S, Kast SM.
Tielker N, et al.
J Comput Aided Mol Des. 2021 Aug;35(8):933-941. doi: 10.1007/s10822-021-00410-9. Epub 2021 Jul 19.
J Comput Aided Mol Des. 2021.
PMID: 34278539
Free PMC article.
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pKa calculations for tautomerizable and conformationally flexible molecules: partition function vs. state transition approach.
Tielker N, Eberlein L, Chodun C, Güssregen S, Kast SM.
Tielker N, et al.
J Mol Model. 2019 Apr 30;25(5):139. doi: 10.1007/s00894-019-4033-4.
J Mol Model. 2019.
PMID: 31041535
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Pressure-dependent electronic structure calculations using integral equation-based solvation models.
Pongratz T, Kibies P, Eberlein L, Tielker N, Hölzl C, Imoto S, Beck Erlach M, Kurrmann S, Schummel PH, Hofmann M, Reiser O, Winter R, Kremer W, Kalbitzer HR, Marx D, Horinek D, Kast SM.
Pongratz T, et al. Among authors: tielker n.
Biophys Chem. 2020 Feb;257:106258. doi: 10.1016/j.bpc.2019.106258. Epub 2019 Aug 27.
Biophys Chem. 2020.
PMID: 31881504
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