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BiCAMWI: A Genetic-Based Biclustering Algorithm for Detecting Dynamic Protein Complexes.
PLoS One. 2016 Jul 27;11(7):e0159923. doi: 10.1371/journal.pone.0159923. eCollection 2016.
PLoS One. 2016.
PMID: 27462706
Free PMC article.
PCD-GED: Protein complex detection considering PPI dynamics based on time series gene expression data.
Lakizadeh A, Jalili S, Marashi SA.
Lakizadeh A, et al.
J Theor Biol. 2015 Aug 7;378:31-8. doi: 10.1016/j.jtbi.2015.04.020. Epub 2015 Apr 29.
J Theor Biol. 2015.
PMID: 25934349
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CAMWI: Detecting protein complexes using weighted clustering coefficient and weighted density.
Lakizadeh A, Jalili S, Marashi SA.
Lakizadeh A, et al.
Comput Biol Chem. 2015 Oct;58:231-40. doi: 10.1016/j.compbiolchem.2015.07.012. Epub 2015 Jul 30.
Comput Biol Chem. 2015.
PMID: 26319550
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Detection of polypharmacy side effects by integrating multiple data sources and convolutional neural networks.
Lakizadeh A, Babaei M.
Lakizadeh A, et al.
Mol Divers. 2022 Dec;26(6):3193-3203. doi: 10.1007/s11030-022-10382-z. Epub 2022 Jan 24.
Mol Divers. 2022.
PMID: 35072838
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Prediction of drug-drug interaction events using graph neural networks based feature extraction.
Al-Rabeah MH, Lakizadeh A.
Al-Rabeah MH, et al. Among authors: lakizadeh a.
Sci Rep. 2022 Sep 16;12(1):15590. doi: 10.1038/s41598-022-19999-4.
Sci Rep. 2022.
PMID: 36114278
Free PMC article.
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Prediction of thermostability from amino acid attributes by combination of clustering with attribute weighting: a new vista in engineering enzymes.
Ebrahimi M, Lakizadeh A, Agha-Golzadeh P, Ebrahimie E, Ebrahimi M.
Ebrahimi M, et al. Among authors: lakizadeh a.
PLoS One. 2011;6(8):e23146. doi: 10.1371/journal.pone.0023146. Epub 2011 Aug 10.
PLoS One. 2011.
PMID: 21853079
Free PMC article.
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