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The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability.
Diehl AD, Meehan TF, Bradford YM, Brush MH, Dahdul WM, Dougall DS, He Y, Osumi-Sutherland D, Ruttenberg A, Sarntivijai S, Van Slyke CE, Vasilevsky NA, Haendel MA, Blake JA, Mungall CJ. Diehl AD, et al. Among authors: blake ja. J Biomed Semantics. 2016 Jul 4;7(1):44. doi: 10.1186/s13326-016-0088-7. J Biomed Semantics. 2016. PMID: 27377652 Free PMC article.
Ontology development for biological systems: immunology.
Diehl AD, Lee JA, Scheuermann RH, Blake JA. Diehl AD, et al. Among authors: blake ja. Bioinformatics. 2007 Apr 1;23(7):913-5. doi: 10.1093/bioinformatics/btm029. Epub 2007 Jan 31. Bioinformatics. 2007. PMID: 17267433
Access to immunology through the Gene Ontology.
Lovering RC, Camon EB, Blake JA, Diehl AD. Lovering RC, et al. Among authors: blake ja. Immunology. 2008 Oct;125(2):154-60. doi: 10.1111/j.1365-2567.2008.02940.x. Immunology. 2008. PMID: 18798919 Free PMC article. Review.
The Gene Ontology in 2010: extensions and refinements.
Gene Ontology Consortium. Gene Ontology Consortium. Nucleic Acids Res. 2010 Jan;38(Database issue):D331-5. doi: 10.1093/nar/gkp1018. Epub 2009 Nov 17. Nucleic Acids Res. 2010. PMID: 19920128 Free PMC article.
Hematopoietic cell types: prototype for a revised cell ontology.
Diehl AD, Augustine AD, Blake JA, Cowell LG, Gold ES, Gondré-Lewis TA, Masci AM, Meehan TF, Morel PA, Nijnik A, Peters B, Pulendran B, Scheuermann RH, Yao QA, Zand MS, Mungall CJ. Diehl AD, et al. Among authors: blake ja. J Biomed Inform. 2011 Feb;44(1):75-9. doi: 10.1016/j.jbi.2010.01.006. Epub 2010 Feb 1. J Biomed Inform. 2011. PMID: 20123131 Free PMC article.
Logical development of the cell ontology.
Meehan TF, Masci AM, Abdulla A, Cowell LG, Blake JA, Mungall CJ, Diehl AD. Meehan TF, et al. Among authors: blake ja. BMC Bioinformatics. 2011 Jan 5;12:6. doi: 10.1186/1471-2105-12-6. BMC Bioinformatics. 2011. PMID: 21208450 Free PMC article.
Autism candidate genes via mouse phenomics.
Meehan TF, Carr CJ, Jay JJ, Bult CJ, Chesler EJ, Blake JA. Meehan TF, et al. Among authors: blake ja. J Biomed Inform. 2011 Dec;44 Suppl 1(Suppl 1):S5-S11. doi: 10.1016/j.jbi.2011.03.003. Epub 2011 Mar 21. J Biomed Inform. 2011. PMID: 21397722 Free PMC article.
The representation of protein complexes in the Protein Ontology (PRO).
Bult CJ, Drabkin HJ, Evsikov A, Natale D, Arighi C, Roberts N, Ruttenberg A, D'Eustachio P, Smith B, Blake JA, Wu C. Bult CJ, et al. Among authors: blake ja. BMC Bioinformatics. 2011 Sep 19;12:371. doi: 10.1186/1471-2105-12-371. BMC Bioinformatics. 2011. PMID: 21929785 Free PMC article.
207 results