Phillips-Cremins JE - Search Results

1

Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State during Somatic Cell Reprogramming.

Beagan JA, Gilgenast TG, Kim J, Plona Z, Norton HK, Hu G, Hsu SC, Shields EJ, Lyu X, Apostolou E, Hochedlinger K, Corces VG, Dekker J, Phillips-Cremins JE. Beagan JA, et al. Cell Stem Cell. 2016 May 5;18(5):611-24. doi: 10.1016/j.stem.2016.04.004. Cell Stem Cell. 2016. PMID: 27152443 Free PMC article.

2

Architectural protein subclasses shape 3D organization of genomes during lineage commitment.

Phillips-Cremins JE, Sauria ME, Sanyal A, Gerasimova TI, Lajoie BR, Bell JS, Ong CT, Hookway TA, Guo C, Sun Y, Bland MJ, Wagstaff W, Dalton S, McDevitt TC, Sen R, Dekker J, Taylor J, Corces VG. Phillips-Cremins JE, et al. Cell. 2013 Jun 6;153(6):1281-95. doi: 10.1016/j.cell.2013.04.053. Epub 2013 May 23. Cell. 2013. PMID: 23706625 Free PMC article.

3

Chromatin insulators: linking genome organization to cellular function.

Phillips-Cremins JE, Corces VG. Phillips-Cremins JE, et al. Mol Cell. 2013 May 23;50(4):461-74. doi: 10.1016/j.molcel.2013.04.018. Mol Cell. 2013. PMID: 23706817 Free PMC article. Review.

4

Unraveling architecture of the pluripotent genome.

Phillips-Cremins JE. Phillips-Cremins JE. Curr Opin Cell Biol. 2014 Jun;28:96-104. doi: 10.1016/j.ceb.2014.04.006. Epub 2014 Jun 2. Curr Opin Cell Biol. 2014. PMID: 24813689 Review.

5

HiFive: a tool suite for easy and efficient HiC and 5C data analysis.

Sauria ME, Phillips-Cremins JE, Corces VG, Taylor J. Sauria ME, et al. Genome Biol. 2015 Oct 24;16:237. doi: 10.1186/s13059-015-0806-y. Genome Biol. 2015. PMID: 26498826 Free PMC article.

6

CRISPR/Cas9 genome editing throws descriptive 3-D genome folding studies for a loop.

Beagan JA, Phillips-Cremins JE. Beagan JA, et al. Wiley Interdiscip Rev Syst Biol Med. 2016 Jul;8(4):286-99. doi: 10.1002/wsbm.1338. Epub 2016 Jun 6. Wiley Interdiscip Rev Syst Biol Med. 2016. PMID: 27265842 Free PMC article. Review.

7

The BET Protein BRD2 Cooperates with CTCF to Enforce Transcriptional and Architectural Boundaries.

Hsu SC, Gilgenast TG, Bartman CR, Edwards CR, Stonestrom AJ, Huang P, Emerson DJ, Evans P, Werner MT, Keller CA, Giardine B, Hardison RC, Raj A, Phillips-Cremins JE, Blobel GA. Hsu SC, et al. Mol Cell. 2017 Apr 6;66(1):102-116.e7. doi: 10.1016/j.molcel.2017.02.027. Mol Cell. 2017. PMID: 28388437 Free PMC article.

8

YY1 and CTCF orchestrate a 3D chromatin looping switch during early neural lineage commitment.

Beagan JA, Duong MT, Titus KR, Zhou L, Cao Z, Ma J, Lachanski CV, Gillis DR, Phillips-Cremins JE. Beagan JA, et al. Genome Res. 2017 Jul;27(7):1139-1152. doi: 10.1101/gr.215160.116. Epub 2017 May 23. Genome Res. 2017. PMID: 28536180 Free PMC article.

9

Crossed wires: 3D genome misfolding in human disease.

Norton HK, Phillips-Cremins JE. Norton HK, et al. J Cell Biol. 2017 Nov 6;216(11):3441-3452. doi: 10.1083/jcb.201611001. Epub 2017 Aug 30. J Cell Biol. 2017. PMID: 28855250 Free PMC article. Review.

10

Dynamic Looping Interactions: Setting the 3D Stage for the Macrophage.

Rege M, Phillips-Cremins JE. Rege M, et al. Mol Cell. 2017 Sep 21;67(6):901-903. doi: 10.1016/j.molcel.2017.09.011. Mol Cell. 2017. PMID: 28938095 Free PMC article.

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