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272 results

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Page 1
The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries.
Barquist L, Mayho M, Cummins C, Cain AK, Boinett CJ, Page AJ, Langridge GC, Quail MA, Keane JA, Parkhill J. Barquist L, et al. Among authors: quail ma. Bioinformatics. 2016 Apr 1;32(7):1109-11. doi: 10.1093/bioinformatics/btw022. Epub 2016 Jan 21. Bioinformatics. 2016. PMID: 26794317 Free PMC article.
Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei.
Bentley SD, Maiwald M, Murphy LD, Pallen MJ, Yeats CA, Dover LG, Norbertczak HT, Besra GS, Quail MA, Harris DE, von Herbay A, Goble A, Rutter S, Squares R, Squares S, Barrell BG, Parkhill J, Relman DA. Bentley SD, et al. Among authors: quail ma. Lancet. 2003 Feb 22;361(9358):637-44. doi: 10.1016/S0140-6736(03)12597-4. Lancet. 2003. PMID: 12606174
Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.
Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, Harris DE, Holden MT, Churcher CM, Bentley SD, Mungall KL, Cerdeño-Tárraga AM, Temple L, James K, Harris B, Quail MA, Achtman M, Atkin R, Baker S, Basham D, Bason N, Cherevach I, Chillingworth T, Collins M, Cronin A, Davis P, Doggett J, Feltwell T, Goble A, Hamlin N, Hauser H, Holroyd S, Jagels K, Leather S, Moule S, Norberczak H, O'Neil S, Ormond D, Price C, Rabbinowitsch E, Rutter S, Sanders M, Saunders D, Seeger K, Sharp S, Simmonds M, Skelton J, Squares R, Squares S, Stevens K, Unwin L, Whitehead S, Barrell BG, Maskell DJ. Parkhill J, et al. Among authors: quail ma. Nat Genet. 2003 Sep;35(1):32-40. doi: 10.1038/ng1227. Epub 2003 Aug 10. Nat Genet. 2003. PMID: 12910271
Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance.
Holden MT, Feil EJ, Lindsay JA, Peacock SJ, Day NP, Enright MC, Foster TJ, Moore CE, Hurst L, Atkin R, Barron A, Bason N, Bentley SD, Chillingworth C, Chillingworth T, Churcher C, Clark L, Corton C, Cronin A, Doggett J, Dowd L, Feltwell T, Hance Z, Harris B, Hauser H, Holroyd S, Jagels K, James KD, Lennard N, Line A, Mayes R, Moule S, Mungall K, Ormond D, Quail MA, Rabbinowitsch E, Rutherford K, Sanders M, Sharp S, Simmonds M, Stevens K, Whitehead S, Barrell BG, Spratt BG, Parkhill J. Holden MT, et al. Among authors: quail ma. Proc Natl Acad Sci U S A. 2004 Jun 29;101(26):9786-91. doi: 10.1073/pnas.0402521101. Epub 2004 Jun 22. Proc Natl Acad Sci U S A. 2004. PMID: 15213324 Free PMC article.
Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei.
Holden MT, Titball RW, Peacock SJ, Cerdeño-Tárraga AM, Atkins T, Crossman LC, Pitt T, Churcher C, Mungall K, Bentley SD, Sebaihia M, Thomson NR, Bason N, Beacham IR, Brooks K, Brown KA, Brown NF, Challis GL, Cherevach I, Chillingworth T, Cronin A, Crossett B, Davis P, DeShazer D, Feltwell T, Fraser A, Hance Z, Hauser H, Holroyd S, Jagels K, Keith KE, Maddison M, Moule S, Price C, Quail MA, Rabbinowitsch E, Rutherford K, Sanders M, Simmonds M, Songsivilai S, Stevens K, Tumapa S, Vesaratchavest M, Whitehead S, Yeats C, Barrell BG, Oyston PC, Parkhill J. Holden MT, et al. Among authors: quail ma. Proc Natl Acad Sci U S A. 2004 Sep 28;101(39):14240-5. doi: 10.1073/pnas.0403302101. Epub 2004 Sep 17. Proc Natl Acad Sci U S A. 2004. PMID: 15377794 Free PMC article.
Extensive DNA inversions in the B. fragilis genome control variable gene expression.
Cerdeño-Tárraga AM, Patrick S, Crossman LC, Blakely G, Abratt V, Lennard N, Poxton I, Duerden B, Harris B, Quail MA, Barron A, Clark L, Corton C, Doggett J, Holden MT, Larke N, Line A, Lord A, Norbertczak H, Ormond D, Price C, Rabbinowitsch E, Woodward J, Barrell B, Parkhill J. Cerdeño-Tárraga AM, et al. Among authors: quail ma. Science. 2005 Mar 4;307(5714):1463-5. doi: 10.1126/science.1107008. Science. 2005. PMID: 15746427
The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation.
Thomson NR, Yeats C, Bell K, Holden MT, Bentley SD, Livingstone M, Cerdeño-Tárraga AM, Harris B, Doggett J, Ormond D, Mungall K, Clarke K, Feltwell T, Hance Z, Sanders M, Quail MA, Price C, Barrell BG, Parkhill J, Longbottom D. Thomson NR, et al. Among authors: quail ma. Genome Res. 2005 May;15(5):629-40. doi: 10.1101/gr.3684805. Epub 2005 Apr 18. Genome Res. 2005. PMID: 15837807 Free PMC article.
Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes.
Bentley SD, Aanensen DM, Mavroidi A, Saunders D, Rabbinowitsch E, Collins M, Donohoe K, Harris D, Murphy L, Quail MA, Samuel G, Skovsted IC, Kaltoft MS, Barrell B, Reeves PR, Parkhill J, Spratt BG. Bentley SD, et al. Among authors: quail ma. PLoS Genet. 2006 Mar;2(3):e31. doi: 10.1371/journal.pgen.0020031. Epub 2006 Mar 10. PLoS Genet. 2006. PMID: 16532061 Free PMC article.
The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome.
Sebaihia M, Wren BW, Mullany P, Fairweather NF, Minton N, Stabler R, Thomson NR, Roberts AP, Cerdeño-Tárraga AM, Wang H, Holden MT, Wright A, Churcher C, Quail MA, Baker S, Bason N, Brooks K, Chillingworth T, Cronin A, Davis P, Dowd L, Fraser A, Feltwell T, Hance Z, Holroyd S, Jagels K, Moule S, Mungall K, Price C, Rabbinowitsch E, Sharp S, Simmonds M, Stevens K, Unwin L, Whithead S, Dupuy B, Dougan G, Barrell B, Parkhill J. Sebaihia M, et al. Among authors: quail ma. Nat Genet. 2006 Jul;38(7):779-86. doi: 10.1038/ng1830. Epub 2006 Jun 25. Nat Genet. 2006. PMID: 16804543
Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction.
Sebaihia M, Preston A, Maskell DJ, Kuzmiak H, Connell TD, King ND, Orndorff PE, Miyamoto DM, Thomson NR, Harris D, Goble A, Lord A, Murphy L, Quail MA, Rutter S, Squares R, Squares S, Woodward J, Parkhill J, Temple LM. Sebaihia M, et al. Among authors: quail ma. J Bacteriol. 2006 Aug;188(16):6002-15. doi: 10.1128/JB.01927-05. J Bacteriol. 2006. PMID: 16885469 Free PMC article.
272 results