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DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts.
Paraskevopoulou MD, Vlachos IS, Karagkouni D, Georgakilas G, Kanellos I, Vergoulis T, Zagganas K, Tsanakas P, Floros E, Dalamagas T, Hatzigeorgiou AG. Paraskevopoulou MD, et al. Nucleic Acids Res. 2016 Jan 4;44(D1):D231-8. doi: 10.1093/nar/gkv1270. Epub 2015 Nov 26. Nucleic Acids Res. 2016. PMID: 26612864 Free PMC article.
DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways.
Vlachos IS, Kostoulas N, Vergoulis T, Georgakilas G, Reczko M, Maragkakis M, Paraskevopoulou MD, Prionidis K, Dalamagas T, Hatzigeorgiou AG. Vlachos IS, et al. Among authors: paraskevopoulou md. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W498-504. doi: 10.1093/nar/gks494. Epub 2012 May 30. Nucleic Acids Res. 2012. PMID: 22649059 Free PMC article.
DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions.
Vlachos IS, Paraskevopoulou MD, Karagkouni D, Georgakilas G, Vergoulis T, Kanellos I, Anastasopoulos IL, Maniou S, Karathanou K, Kalfakakou D, Fevgas A, Dalamagas T, Hatzigeorgiou AG. Vlachos IS, et al. Among authors: paraskevopoulou md. Nucleic Acids Res. 2015 Jan;43(Database issue):D153-9. doi: 10.1093/nar/gku1215. Epub 2014 Nov 21. Nucleic Acids Res. 2015. PMID: 25416803 Free PMC article.
DIANA-miRPath v3.0: deciphering microRNA function with experimental support.
Vlachos IS, Zagganas K, Paraskevopoulou MD, Georgakilas G, Karagkouni D, Vergoulis T, Dalamagas T, Hatzigeorgiou AG. Vlachos IS, et al. Among authors: paraskevopoulou md. Nucleic Acids Res. 2015 Jul 1;43(W1):W460-6. doi: 10.1093/nar/gkv403. Epub 2015 May 14. Nucleic Acids Res. 2015. PMID: 25977294 Free PMC article.
DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators.
Georgakilas G, Vlachos IS, Zagganas K, Vergoulis T, Paraskevopoulou MD, Kanellos I, Tsanakas P, Dellis D, Fevgas A, Dalamagas T, Hatzigeorgiou AG. Georgakilas G, et al. Among authors: paraskevopoulou md. Nucleic Acids Res. 2016 Jan 4;44(D1):D190-5. doi: 10.1093/nar/gkv1254. Epub 2015 Nov 19. Nucleic Acids Res. 2016. PMID: 26586797 Free PMC article.
Analyzing MiRNA-LncRNA Interactions.
Paraskevopoulou MD, Hatzigeorgiou AG. Paraskevopoulou MD, et al. Methods Mol Biol. 2016;1402:271-286. doi: 10.1007/978-1-4939-3378-5_21. Methods Mol Biol. 2016. PMID: 26721498
DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data.
Vlachos IS, Vergoulis T, Paraskevopoulou MD, Lykokanellos F, Georgakilas G, Georgiou P, Chatzopoulos S, Karagkouni D, Christodoulou F, Dalamagas T, Hatzigeorgiou AG. Vlachos IS, et al. Among authors: paraskevopoulou md. Nucleic Acids Res. 2016 Jul 8;44(W1):W128-34. doi: 10.1093/nar/gkw455. Epub 2016 May 20. Nucleic Acids Res. 2016. PMID: 27207881 Free PMC article.
32 results