Sipkema D - Search Results

1

Impact of a wastewater treatment plant on microbial community composition and function in a hyporheic zone of a eutrophic river.

Atashgahi S, Aydin R, Dimitrov MR, Sipkema D, Hamonts K, Lahti L, Maphosa F, Kruse T, Saccenti E, Springael D, Dejonghe W, Smidt H. Atashgahi S, et al. Among authors: sipkema d. Sci Rep. 2015 Nov 26;5:17284. doi: 10.1038/srep17284. Sci Rep. 2015. PMID: 26607034 Free PMC article.

2

Cultivation of sponges, sponge cells and symbionts: achievements and future prospects.

Schippers KJ, Sipkema D, Osinga R, Smidt H, Pomponi SA, Martens DE, Wijffels RH. Schippers KJ, et al. Among authors: sipkema d. Adv Mar Biol. 2012;62:273-337. doi: 10.1016/B978-0-12-394283-8.00006-0. Adv Mar Biol. 2012. PMID: 22664125

3

Culture-dependent and independent approaches for identifying novel halogenases encoded by Crambe crambe (marine sponge) microbiota.

Öztürk B, de Jaeger L, Smidt H, Sipkema D. Öztürk B, et al. Among authors: sipkema d. Sci Rep. 2013 Sep 27;3:2780. doi: 10.1038/srep02780. Sci Rep. 2013. PMID: 24071658 Free PMC article.

4

Cultivation-independent screening revealed hot spots of IncP-1, IncP-7 and IncP-9 plasmid occurrence in different environmental habitats.

Dealtry S, Ding GC, Weichelt V, Dunon V, Schlüter A, Martini MC, Del Papa MF, Lagares A, Amos GC, Wellington EM, Gaze WH, Sipkema D, Sjöling S, Springael D, Heuer H, van Elsas JD, Thomas C, Smalla K. Dealtry S, et al. Among authors: sipkema d. PLoS One. 2014 Feb 24;9(2):e89922. doi: 10.1371/journal.pone.0089922. eCollection 2014. PLoS One. 2014. PMID: 24587126 Free PMC article.

5

The colonization dynamics of the gut microbiota in tilapia larvae.

Giatsis C, Sipkema D, Smidt H, Verreth J, Verdegem M. Giatsis C, et al. Among authors: sipkema d. PLoS One. 2014 Jul 29;9(7):e103641. doi: 10.1371/journal.pone.0103641. eCollection 2014. PLoS One. 2014. PMID: 25072852 Free PMC article.

6

Host-specific microbial communities in three sympatric North Sea sponges.

Naim MA, Morillo JA, Sørensen SJ, Waleed AA, Smidt H, Sipkema D. Naim MA, et al. Among authors: sipkema d. FEMS Microbiol Ecol. 2014 Nov;90(2):390-403. doi: 10.1111/1574-6941.12400. Epub 2014 Sep 15. FEMS Microbiol Ecol. 2014. PMID: 25088929 Free article.

7

Similar sponge-associated bacteria can be acquired via both vertical and horizontal transmission.

Sipkema D, de Caralt S, Morillo JA, Al-Soud WA, Sørensen SJ, Smidt H, Uriz MJ. Sipkema D, et al. Environ Microbiol. 2015 Oct;17(10):3807-21. doi: 10.1111/1462-2920.12827. Epub 2015 Apr 15. Environ Microbiol. 2015. PMID: 25732544

8

Impact of a novel protein meal on the gastrointestinal microbiota and the host transcriptome of larval zebrafish Danio rerio.

Rurangwa E, Sipkema D, Kals J, Ter Veld M, Forlenza M, Bacanu GM, Smidt H, Palstra AP. Rurangwa E, et al. Among authors: sipkema d. Front Physiol. 2015 Apr 30;6:133. doi: 10.3389/fphys.2015.00133. eCollection 2015. Front Physiol. 2015. PMID: 25983694 Free PMC article.

9

Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditions.

Versluis D, D'Andrea MM, Ramiro Garcia J, Leimena MM, Hugenholtz F, Zhang J, Öztürk B, Nylund L, Sipkema D, van Schaik W, de Vos WM, Kleerebezem M, Smidt H, van Passel MW. Versluis D, et al. Among authors: sipkema d, d andrea mm. Sci Rep. 2015 Jul 8;5:11981. doi: 10.1038/srep11981. Sci Rep. 2015. PMID: 26153129 Free PMC article.

10

The impact of rearing environment on the development of gut microbiota in tilapia larvae.

Giatsis C, Sipkema D, Smidt H, Heilig H, Benvenuti G, Verreth J, Verdegem M. Giatsis C, et al. Among authors: sipkema d. Sci Rep. 2015 Dec 11;5:18206. doi: 10.1038/srep18206. Sci Rep. 2015. PMID: 26658351 Free PMC article.

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