Zhang YE - Search Results

1

Emergence, Retention and Selection: A Trilogy of Origination for Functional De Novo Proteins from Ancestral LncRNAs in Primates.

Chen JY, Shen QS, Zhou WZ, Peng J, He BZ, Li Y, Liu CJ, Luan X, Ding W, Li S, Chen C, Tan BC, Zhang YE, He A, Li CY. Chen JY, et al. Among authors: zhang ye. PLoS Genet. 2015 Jul 15;11(7):e1005391. doi: 10.1371/journal.pgen.1005391. eCollection 2015 Jul. PLoS Genet. 2015. PMID: 26177073 Free PMC article.

2

New genes expressed in human brains: implications for annotating evolving genomes.

Zhang YE, Landback P, Vibranovski M, Long M. Zhang YE, et al. Bioessays. 2012 Nov;34(11):982-91. doi: 10.1002/bies.201200008. Epub 2012 Sep 24. Bioessays. 2012. PMID: 23001763 Review.

3

Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs.

Xie C, Zhang YE, Chen JY, Liu CJ, Zhou WZ, Li Y, Zhang M, Zhang R, Wei L, Li CY. Xie C, et al. Among authors: zhang m, zhang r, zhang ye. PLoS Genet. 2012 Sep;8(9):e1002942. doi: 10.1371/journal.pgen.1002942. Epub 2012 Sep 13. PLoS Genet. 2012. PMID: 23028352 Free PMC article.

4

Evolutionary interrogation of human biology in well-annotated genomic framework of rhesus macaque.

Zhang SJ, Liu CJ, Yu P, Zhong X, Chen JY, Yang X, Peng J, Yan S, Wang C, Zhu X, Xiong J, Zhang YE, Tan BC, Li CY. Zhang SJ, et al. Among authors: zhang ye. Mol Biol Evol. 2014 May;31(5):1309-24. doi: 10.1093/molbev/msu084. Epub 2014 Feb 27. Mol Biol Evol. 2014. PMID: 24577841 Free PMC article.

5

RNA editome in rhesus macaque shaped by purifying selection.

Chen JY, Peng Z, Zhang R, Yang XZ, Tan BC, Fang H, Liu CJ, Shi M, Ye ZQ, Zhang YE, Deng M, Zhang X, Li CY. Chen JY, et al. Among authors: zhang r, zhang ye, ye zq, zhang x. PLoS Genet. 2014 Apr 10;10(4):e1004274. doi: 10.1371/journal.pgen.1004274. eCollection 2014 Apr. PLoS Genet. 2014. PMID: 24722121 Free PMC article.

6

Expression profile and gene age jointly shaped the genome-wide distribution of premature termination codons in a Drosophila melanogaster population.

Yang H, He BZ, Ma H, Tsaur SC, Ma C, Wu Y, Ting CT, Zhang YE. Yang H, et al. Among authors: zhang ye. Mol Biol Evol. 2015 Jan;32(1):216-28. doi: 10.1093/molbev/msu299. Epub 2014 Nov 3. Mol Biol Evol. 2015. PMID: 25371429 Free PMC article.

7

Integrative analyses of RNA editing, alternative splicing, and expression of young genes in human brain transcriptome by deep RNA sequencing.

Wu DD, Ye LQ, Li Y, Sun YB, Shao Y, Chen C, Zhu Z, Zhong L, Wang L, Irwin DM, Zhang YE, Zhang YP. Wu DD, et al. Among authors: zhang yp, zhang ye, ye lq. J Mol Cell Biol. 2015 Aug;7(4):314-25. doi: 10.1093/jmcb/mjv043. Epub 2015 Jul 17. J Mol Cell Biol. 2015. PMID: 26186942

8

Divergent lncRNAs Regulate Gene Expression and Lineage Differentiation in Pluripotent Cells.

Luo S, Lu JY, Liu L, Yin Y, Chen C, Han X, Wu B, Xu R, Liu W, Yan P, Shao W, Lu Z, Li H, Na J, Tang F, Wang J, Zhang YE, Shen X. Luo S, et al. Among authors: zhang ye. Cell Stem Cell. 2016 May 5;18(5):637-52. doi: 10.1016/j.stem.2016.01.024. Epub 2016 Mar 17. Cell Stem Cell. 2016. PMID: 26996597 Free article.

9

LTR-mediated retroposition as a mechanism of RNA-based duplication in metazoans.

Tan S, Cardoso-Moreira M, Shi W, Zhang D, Huang J, Mao Y, Jia H, Zhang Y, Chen C, Shao Y, Leng L, Liu Z, Huang X, Long M, Zhang YE. Tan S, et al. Among authors: zhang d, zhang ye, zhang y. Genome Res. 2016 Dec;26(12):1663-1675. doi: 10.1101/gr.204925.116. Epub 2016 Oct 20. Genome Res. 2016. PMID: 27934698 Free PMC article.

10

Evolutionarily significant A-to-I RNA editing events originated through G-to-A mutations in primates.

An NA, Ding W, Yang XZ, Peng J, He BZ, Shen QS, Lu F, He A, Zhang YE, Tan BC, Chen JY, Li CY. An NA, et al. Among authors: zhang ye. Genome Biol. 2019 Feb 4;20(1):24. doi: 10.1186/s13059-019-1638-y. Genome Biol. 2019. PMID: 30712515 Free PMC article.

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