Gupta YK - Search Results

1

Expression and purification of a single-chain Type IV restriction enzyme Eco94GmrSD and determination of its substrate preference.

He X, Hull V, Thomas JA, Fu X, Gidwani S, Gupta YK, Black LW, Xu SY. He X, et al. Among authors: gupta yk. Sci Rep. 2015 May 19;5:9747. doi: 10.1038/srep09747. Sci Rep. 2015. PMID: 25988532 Free PMC article.

2

Natural zinc ribbon HNH endonucleases and engineered zinc finger nicking endonuclease.

Xu SY, Gupta YK. Xu SY, et al. Among authors: gupta yk. Nucleic Acids Res. 2013 Jan 7;41(1):378-90. doi: 10.1093/nar/gks1043. Epub 2012 Nov 3. Nucleic Acids Res. 2013. PMID: 23125367 Free PMC article.

3

Characterization of type II and III restriction-modification systems from Bacillus cereus strains ATCC 10987 and ATCC 14579.

Xu SY, Nugent RL, Kasamkattil J, Fomenkov A, Gupta Y, Aggarwal A, Wang X, Li Z, Zheng Y, Morgan R. Xu SY, et al. J Bacteriol. 2012 Jan;194(1):49-60. doi: 10.1128/JB.06248-11. Epub 2011 Oct 28. J Bacteriol. 2012. PMID: 22037402 Free PMC article.

4

Structural insights into the assembly and shape of Type III restriction-modification (R-M) EcoP15I complex by small-angle X-ray scattering.

Gupta YK, Yang L, Chan SH, Samuelson JC, Xu SY, Aggarwal AK. Gupta YK, et al. J Mol Biol. 2012 Jul 20;420(4-5):261-8. doi: 10.1016/j.jmb.2012.04.026. Epub 2012 May 2. J Mol Biol. 2012. PMID: 22560991 Free PMC article.

5

Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15I.

Gupta YK, Chan SH, Xu SY, Aggarwal AK. Gupta YK, et al. Nat Commun. 2015 Jun 12;6:7363. doi: 10.1038/ncomms8363. Nat Commun. 2015. PMID: 26067164 Free PMC article.

6

Structure and mechanism of human PrimPol, a DNA polymerase with primase activity.

Rechkoblit O, Gupta YK, Malik R, Rajashankar KR, Johnson RE, Prakash L, Prakash S, Aggarwal AK. Rechkoblit O, et al. Among authors: gupta yk. Sci Adv. 2016 Oct 21;2(10):e1601317. doi: 10.1126/sciadv.1601317. eCollection 2016 Oct. Sci Adv. 2016. PMID: 27819052 Free PMC article.

7

Structure of Type IIL Restriction-Modification Enzyme MmeI in Complex with DNA Has Implications for Engineering New Specificities.

Callahan SJ, Luyten YA, Gupta YK, Wilson GG, Roberts RJ, Morgan RD, Aggarwal AK. Callahan SJ, et al. Among authors: gupta yk. PLoS Biol. 2016 Apr 15;14(4):e1002442. doi: 10.1371/journal.pbio.1002442. eCollection 2016 Apr. PLoS Biol. 2016. PMID: 27082731 Free PMC article.

8

A metal ion orients SARS-CoV-2 mRNA to ensure accurate 2'-O methylation of its first nucleotide.

Viswanathan T, Misra A, Chan SH, Qi S, Dai N, Arya S, Martinez-Sobrido L, Gupta YK. Viswanathan T, et al. Among authors: gupta yk. Nat Commun. 2021 Jun 2;12(1):3287. doi: 10.1038/s41467-021-23594-y. Nat Commun. 2021. PMID: 34078893 Free PMC article.

9

Solution structure of the Vts1 SAM domain in the presence of RNA.

Edwards TA, Butterwick JA, Zeng L, Gupta YK, Wang X, Wharton RP, Palmer AG 3rd, Aggarwal AK. Edwards TA, et al. Among authors: gupta yk. J Mol Biol. 2006 Mar 10;356(5):1065-72. doi: 10.1016/j.jmb.2005.12.004. Epub 2005 Dec 20. J Mol Biol. 2006. PMID: 16405996

10

Structural basis of RNA cap modification by SARS-CoV-2.

Viswanathan T, Arya S, Chan SH, Qi S, Dai N, Misra A, Park JG, Oladunni F, Kovalskyy D, Hromas RA, Martinez-Sobrido L, Gupta YK. Viswanathan T, et al. Among authors: gupta yk. Nat Commun. 2020 Jul 24;11(1):3718. doi: 10.1038/s41467-020-17496-8. Nat Commun. 2020. PMID: 32709886 Free PMC article.

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