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Long-Term Balancing Selection in LAD1 Maintains a Missense Trans-Species Polymorphism in Humans, Chimpanzees, and Bonobos.
Teixeira JC, de Filippo C, Weihmann A, Meneu JR, Racimo F, Dannemann M, Nickel B, Fischer A, Halbwax M, Andre C, Atencia R, Meyer M, Parra G, Pääbo S, Andrés AM. Teixeira JC, et al. Among authors: de filippo c. Mol Biol Evol. 2015 May;32(5):1186-96. doi: 10.1093/molbev/msv007. Epub 2015 Jan 19. Mol Biol Evol. 2015. PMID: 25605789
Recent Selection Changes in Human Genes under Long-Term Balancing Selection.
de Filippo C, Key FM, Ghirotto S, Benazzo A, Meneu JR, Weihmann A; NISC Comparative Sequence Program; Parra G, Green ED, Andrés AM. de Filippo C, et al. Mol Biol Evol. 2016 Jun;33(6):1435-47. doi: 10.1093/molbev/msw023. Epub 2016 Feb 1. Mol Biol Evol. 2016. PMID: 26831942 Free PMC article.
Signatures of Long-Term Balancing Selection in Human Genomes.
Bitarello BD, de Filippo C, Teixeira JC, Schmidt JM, Kleinert P, Meyer D, Andrés AM. Bitarello BD, et al. Among authors: de filippo c. Genome Biol Evol. 2018 Mar 1;10(3):939-955. doi: 10.1093/gbe/evy054. Genome Biol Evol. 2018. PMID: 29608730 Free PMC article.
A high-coverage genome sequence from an archaic Denisovan individual.
Meyer M, Kircher M, Gansauge MT, Li H, Racimo F, Mallick S, Schraiber JG, Jay F, Prüfer K, de Filippo C, Sudmant PH, Alkan C, Fu Q, Do R, Rohland N, Tandon A, Siebauer M, Green RE, Bryc K, Briggs AW, Stenzel U, Dabney J, Shendure J, Kitzman J, Hammer MF, Shunkov MV, Derevianko AP, Patterson N, Andrés AM, Eichler EE, Slatkin M, Reich D, Kelso J, Pääbo S. Meyer M, et al. Among authors: de filippo c. Science. 2012 Oct 12;338(6104):222-6. doi: 10.1126/science.1224344. Epub 2012 Aug 30. Science. 2012. PMID: 22936568 Free PMC article.
A high-coverage Neandertal genome from Vindija Cave in Croatia.
Prüfer K, de Filippo C, Grote S, Mafessoni F, Korlević P, Hajdinjak M, Vernot B, Skov L, Hsieh P, Peyrégne S, Reher D, Hopfe C, Nagel S, Maricic T, Fu Q, Theunert C, Rogers R, Skoglund P, Chintalapati M, Dannemann M, Nelson BJ, Key FM, Rudan P, Kućan Ž, Gušić I, Golovanova LV, Doronichev VB, Patterson N, Reich D, Eichler EE, Slatkin M, Schierup MH, Andrés AM, Kelso J, Meyer M, Pääbo S. Prüfer K, et al. Among authors: de filippo c. Science. 2017 Nov 3;358(6363):655-658. doi: 10.1126/science.aao1887. Epub 2017 Oct 5. Science. 2017. PMID: 28982794 Free PMC article.
The impact of endogenous content, replicates and pooling on genome capture from faecal samples.
Hernandez-Rodriguez J, Arandjelovic M, Lester J, de Filippo C, Weihmann A, Meyer M, Angedakin S, Casals F, Navarro A, Vigilant L, Kühl HS, Langergraber K, Boesch C, Hughes D, Marques-Bonet T. Hernandez-Rodriguez J, et al. Among authors: de filippo c. Mol Ecol Resour. 2018 Mar;18(2):319-333. doi: 10.1111/1755-0998.12728. Epub 2017 Dec 4. Mol Ecol Resour. 2018. PMID: 29058768 Free PMC article.
The complete genome sequence of a Neanderthal from the Altai Mountains.
Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, Heinze A, Renaud G, Sudmant PH, de Filippo C, Li H, Mallick S, Dannemann M, Fu Q, Kircher M, Kuhlwilm M, Lachmann M, Meyer M, Ongyerth M, Siebauer M, Theunert C, Tandon A, Moorjani P, Pickrell J, Mullikin JC, Vohr SH, Green RE, Hellmann I, Johnson PL, Blanche H, Cann H, Kitzman JO, Shendure J, Eichler EE, Lein ES, Bakken TE, Golovanova LV, Doronichev VB, Shunkov MV, Derevianko AP, Viola B, Slatkin M, Reich D, Kelso J, Pääbo S. Prüfer K, et al. Among authors: de filippo c. Nature. 2014 Jan 2;505(7481):43-9. doi: 10.1038/nature12886. Epub 2013 Dec 18. Nature. 2014. PMID: 24352235 Free PMC article.
A high-coverage Neandertal genome from Chagyrskaya Cave.
Mafessoni F, Grote S, de Filippo C, Slon V, Kolobova KA, Viola B, Markin SV, Chintalapati M, Peyrégne S, Skov L, Skoglund P, Krivoshapkin AI, Derevianko AP, Meyer M, Kelso J, Peter B, Prüfer K, Pääbo S. Mafessoni F, et al. Among authors: de filippo c. Proc Natl Acad Sci U S A. 2020 Jun 30;117(26):15132-15136. doi: 10.1073/pnas.2004944117. Epub 2020 Jun 16. Proc Natl Acad Sci U S A. 2020. PMID: 32546518 Free PMC article.
186 results