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Effect of Blood Collection Tube Type and Time to Processing on the Enumeration and High-Content Characterization of Circulating Tumor Cells Using the High-Definition Single-Cell Assay.
Rodríguez-Lee M, Kolatkar A, McCormick M, Dago AD, Kendall J, Carlsson NA, Bethel K, Greenspan EJ, Hwang SE, Waitman KR, Nieva JJ, Hicks J, Kuhn P. Rodríguez-Lee M, et al. Arch Pathol Lab Med. 2018 Feb;142(2):198-207. doi: 10.5858/arpa.2016-0483-OA. Epub 2017 Nov 16. Arch Pathol Lab Med. 2018. PMID: 29144792 Free PMC article.
Optimizing sparse sequencing of single cells for highly multiplex copy number profiling.
Baslan T, Kendall J, Ward B, Cox H, Leotta A, Rodgers L, Riggs M, D'Italia S, Sun G, Yong M, Miskimen K, Gilmore H, Saborowski M, Dimitrova N, Krasnitz A, Harris L, Wigler M, Hicks J. Baslan T, et al. Genome Res. 2015 May;25(5):714-24. doi: 10.1101/gr.188060.114. Epub 2015 Apr 9. Genome Res. 2015. PMID: 25858951 Free PMC article.
Updates to the RMAP short-read mapping software.
Smith AD, Chung WY, Hodges E, Kendall J, Hannon G, Hicks J, Xuan Z, Zhang MQ. Smith AD, et al. Bioinformatics. 2009 Nov 1;25(21):2841-2. doi: 10.1093/bioinformatics/btp533. Epub 2009 Sep 7. Bioinformatics. 2009. PMID: 19736251 Free PMC article.
Novel insights into breast cancer copy number genetic heterogeneity revealed by single-cell genome sequencing.
Baslan T, Kendall J, Volyanskyy K, McNamara K, Cox H, D'Italia S, Ambrosio F, Riggs M, Rodgers L, Leotta A, Song J, Mao Y, Wu J, Shah R, Gularte-Mérida R, Chadalavada K, Nanjangud G, Varadan V, Gordon A, Curtis C, Krasnitz A, Dimitrova N, Harris L, Wigler M, Hicks J. Baslan T, et al. Elife. 2020 May 13;9:e51480. doi: 10.7554/eLife.51480. Elife. 2020. PMID: 32401198 Free PMC article.
Tumour evolution inferred by single-cell sequencing.
Navin N, Kendall J, Troge J, Andrews P, Rodgers L, McIndoo J, Cook K, Stepansky A, Levy D, Esposito D, Muthuswamy L, Krasnitz A, McCombie WR, Hicks J, Wigler M. Navin N, et al. Nature. 2011 Apr 7;472(7341):90-4. doi: 10.1038/nature09807. Epub 2011 Mar 13. Nature. 2011. PMID: 21399628 Free PMC article.
Whole-genome single-cell copy number profiling from formalin-fixed paraffin-embedded samples.
Martelotto LG, Baslan T, Kendall J, Geyer FC, Burke KA, Spraggon L, Piscuoglio S, Chadalavada K, Nanjangud G, Ng CK, Moody P, D'Italia S, Rodgers L, Cox H, da Cruz Paula A, Stepansky A, Schizas M, Wen HY, King TA, Norton L, Weigelt B, Hicks JB, Reis-Filho JS. Martelotto LG, et al. Nat Med. 2017 Mar;23(3):376-385. doi: 10.1038/nm.4279. Epub 2017 Feb 6. Nat Med. 2017. PMID: 28165479 Free PMC article.
47 results