Goren A - Search Results

1

Optimization of transcription factor binding map accuracy utilizing knockout-mouse models.

Krebs W, Schmidt SV, Goren A, De Nardo D, Labzin L, Bovier A, Ulas T, Theis H, Kraut M, Latz E, Beyer M, Schultze JL. Krebs W, et al. Among authors: goren a. Nucleic Acids Res. 2014 Dec 1;42(21):13051-60. doi: 10.1093/nar/gku1078. Epub 2014 Nov 5. Nucleic Acids Res. 2014. PMID: 25378309 Free PMC article.

2

Chromatin profiling by directly sequencing small quantities of immunoprecipitated DNA.

Goren A, Ozsolak F, Shoresh N, Ku M, Adli M, Hart C, Gymrek M, Zuk O, Regev A, Milos PM, Bernstein BE. Goren A, et al. Nat Methods. 2010 Jan;7(1):47-9. doi: 10.1038/nmeth.1404. Epub 2009 Nov 29. Nat Methods. 2010. PMID: 19946276 Free PMC article.

3

A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals.

Garber M, Yosef N, Goren A, Raychowdhury R, Thielke A, Guttman M, Robinson J, Minie B, Chevrier N, Itzhaki Z, Blecher-Gonen R, Bornstein C, Amann-Zalcenstein D, Weiner A, Friedrich D, Meldrim J, Ram O, Cheng C, Gnirke A, Fisher S, Friedman N, Wong B, Bernstein BE, Nusbaum C, Hacohen N, Regev A, Amit I. Garber M, et al. Among authors: goren a. Mol Cell. 2012 Sep 14;47(5):810-22. doi: 10.1016/j.molcel.2012.07.030. Epub 2012 Aug 30. Mol Cell. 2012. PMID: 22940246 Free PMC article.

4

Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses.

Amit I, Garber M, Chevrier N, Leite AP, Donner Y, Eisenhaure T, Guttman M, Grenier JK, Li W, Zuk O, Schubert LA, Birditt B, Shay T, Goren A, Zhang X, Smith Z, Deering R, McDonald RC, Cabili M, Bernstein BE, Rinn JL, Meissner A, Root DE, Hacohen N, Regev A. Amit I, et al. Among authors: goren a. Science. 2009 Oct 9;326(5950):257-63. doi: 10.1126/science.1179050. Epub 2009 Sep 3. Science. 2009. PMID: 19729616 Free PMC article.

5

Combinatorial patterning of chromatin regulators uncovered by genome-wide location analysis in human cells.

Ram O, Goren A, Amit I, Shoresh N, Yosef N, Ernst J, Kellis M, Gymrek M, Issner R, Coyne M, Durham T, Zhang X, Donaghey J, Epstein CB, Regev A, Bernstein BE. Ram O, et al. Among authors: goren a. Cell. 2011 Dec 23;147(7):1628-39. doi: 10.1016/j.cell.2011.09.057. Cell. 2011. PMID: 22196736 Free PMC article.

6

Pluripotency transcription factor Oct4 mediates stepwise nucleosome demethylation and depletion.

Shakya A, Callister C, Goren A, Yosef N, Garg N, Khoddami V, Nix D, Regev A, Tantin D. Shakya A, et al. Among authors: goren a. Mol Cell Biol. 2015 Mar;35(6):1014-25. doi: 10.1128/MCB.01105-14. Epub 2015 Jan 12. Mol Cell Biol. 2015. PMID: 25582194 Free PMC article.

7

Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state.

Rotem A, Ram O, Shoresh N, Sperling RA, Goren A, Weitz DA, Bernstein BE. Rotem A, et al. Among authors: goren a. Nat Biotechnol. 2015 Nov;33(11):1165-72. doi: 10.1038/nbt.3383. Epub 2015 Oct 12. Nat Biotechnol. 2015. PMID: 26458175 Free PMC article.

8

Systematic comparison of monoclonal versus polyclonal antibodies for mapping histone modifications by ChIP-seq.

Busby M, Xue C, Li C, Farjoun Y, Gienger E, Yofe I, Gladden A, Epstein CB, Cornett EM, Rothbart SB, Nusbaum C, Goren A. Busby M, et al. Among authors: goren a. Epigenetics Chromatin. 2016 Nov 4;9:49. doi: 10.1186/s13072-016-0100-6. eCollection 2016. Epigenetics Chromatin. 2016. PMID: 27826357 Free PMC article.

9

The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome.

Engreitz JM, Pandya-Jones A, McDonel P, Shishkin A, Sirokman K, Surka C, Kadri S, Xing J, Goren A, Lander ES, Plath K, Guttman M. Engreitz JM, et al. Among authors: goren a. Science. 2013 Aug 16;341(6147):1237973. doi: 10.1126/science.1237973. Epub 2013 Jul 4. Science. 2013. PMID: 23828888 Free PMC article.

10

A flexible ChIP-sequencing simulation toolkit.

Zheng A, Lamkin M, Qiu Y, Ren K, Goren A, Gymrek M. Zheng A, et al. Among authors: goren a. BMC Bioinformatics. 2021 Apr 20;22(1):201. doi: 10.1186/s12859-021-04097-5. BMC Bioinformatics. 2021. PMID: 33879052 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

410 results

Search Page