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Page 1
The Chlamydomonas genome project: a decade on.
Blaby IK, Blaby-Haas CE, Tourasse N, Hom EF, Lopez D, Aksoy M, Grossman A, Umen J, Dutcher S, Porter M, King S, Witman GB, Stanke M, Harris EH, Goodstein D, Grimwood J, Schmutz J, Vallon O, Merchant SS, Prochnik S. Blaby IK, et al. Among authors: prochnik s. Trends Plant Sci. 2014 Oct;19(10):672-80. doi: 10.1016/j.tplants.2014.05.008. Epub 2014 Jun 17. Trends Plant Sci. 2014. PMID: 24950814 Free PMC article. Review.
Novel metabolism in Chlamydomonas through the lens of genomics.
Grossman AR, Croft M, Gladyshev VN, Merchant SS, Posewitz MC, Prochnik S, Spalding MH. Grossman AR, et al. Among authors: prochnik s. Curr Opin Plant Biol. 2007 Apr;10(2):190-8. doi: 10.1016/j.pbi.2007.01.012. Epub 2007 Feb 8. Curr Opin Plant Biol. 2007. PMID: 17291820 Free article. Review.
The Chlamydomonas genome reveals the evolution of key animal and plant functions.
Merchant SS, Prochnik SE, Vallon O, Harris EH, Karpowicz SJ, Witman GB, Terry A, Salamov A, Fritz-Laylin LK, Maréchal-Drouard L, Marshall WF, Qu LH, Nelson DR, Sanderfoot AA, Spalding MH, Kapitonov VV, Ren Q, Ferris P, Lindquist E, Shapiro H, Lucas SM, Grimwood J, Schmutz J, Cardol P, Cerutti H, Chanfreau G, Chen CL, Cognat V, Croft MT, Dent R, Dutcher S, Fernández E, Fukuzawa H, González-Ballester D, González-Halphen D, Hallmann A, Hanikenne M, Hippler M, Inwood W, Jabbari K, Kalanon M, Kuras R, Lefebvre PA, Lemaire SD, Lobanov AV, Lohr M, Manuell A, Meier I, Mets L, Mittag M, Mittelmeier T, Moroney JV, Moseley J, Napoli C, Nedelcu AM, Niyogi K, Novoselov SV, Paulsen IT, Pazour G, Purton S, Ral JP, Riaño-Pachón DM, Riekhof W, Rymarquis L, Schroda M, Stern D, Umen J, Willows R, Wilson N, Zimmer SL, Allmer J, Balk J, Bisova K, Chen CJ, Elias M, Gendler K, Hauser C, Lamb MR, Ledford H, Long JC, Minagawa J, Page MD, Pan J, Pootakham W, Roje S, Rose A, Stahlberg E, Terauchi AM, Yang P, Ball S, Bowler C, Dieckmann CL, Gladyshev VN, Green P, Jorgensen R, Mayfield S, Mueller-Roeber B, Rajamani S, Sayre RT, Brokstein P, Dubchak I, Goodstein D, Hornick L, Huang YW, Jhaveri J, Luo Y,… See abstract for full author list ➔ Merchant SS, et al. Among authors: prochnik se. Science. 2007 Oct 12;318(5848):245-50. doi: 10.1126/science.1143609. Science. 2007. PMID: 17932292 Free PMC article.
Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri.
Prochnik SE, Umen J, Nedelcu AM, Hallmann A, Miller SM, Nishii I, Ferris P, Kuo A, Mitros T, Fritz-Laylin LK, Hellsten U, Chapman J, Simakov O, Rensing SA, Terry A, Pangilinan J, Kapitonov V, Jurka J, Salamov A, Shapiro H, Schmutz J, Grimwood J, Lindquist E, Lucas S, Grigoriev IV, Schmitt R, Kirk D, Rokhsar DS. Prochnik SE, et al. Science. 2010 Jul 9;329(5988):223-6. doi: 10.1126/science.1188800. Science. 2010. PMID: 20616280 Free PMC article.
Evolution of an expanded sex-determining locus in Volvox.
Ferris P, Olson BJ, De Hoff PL, Douglass S, Casero D, Prochnik S, Geng S, Rai R, Grimwood J, Schmutz J, Nishii I, Hamaji T, Nozaki H, Pellegrini M, Umen JG. Ferris P, et al. Among authors: prochnik s. Science. 2010 Apr 16;328(5976):351-4. doi: 10.1126/science.1186222. Science. 2010. PMID: 20395508 Free PMC article.
Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis.
Kim JW, Brawley SH, Prochnik S, Chovatia M, Grimwood J, Jenkins J, LaButti K, Mavromatis K, Nolan M, Zane M, Schmutz J, Stiller JW, Grossman AR. Kim JW, et al. Among authors: prochnik s. PLoS One. 2016 Mar 25;11(3):e0151883. doi: 10.1371/journal.pone.0151883. eCollection 2016. PLoS One. 2016. PMID: 27015628 Free PMC article.
Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta).
Brawley SH, Blouin NA, Ficko-Blean E, Wheeler GL, Lohr M, Goodson HV, Jenkins JW, Blaby-Haas CE, Helliwell KE, Chan CX, Marriage TN, Bhattacharya D, Klein AS, Badis Y, Brodie J, Cao Y, Collén J, Dittami SM, Gachon CMM, Green BR, Karpowicz SJ, Kim JW, Kudahl UJ, Lin S, Michel G, Mittag M, Olson BJSC, Pangilinan JL, Peng Y, Qiu H, Shu S, Singer JT, Smith AG, Sprecher BN, Wagner V, Wang W, Wang ZY, Yan J, Yarish C, Zäuner-Riek S, Zhuang Y, Zou Y, Lindquist EA, Grimwood J, Barry KW, Rokhsar DS, Schmutz J, Stiller JW, Grossman AR, Prochnik SE. Brawley SH, et al. Among authors: prochnik se. Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):E6361-E6370. doi: 10.1073/pnas.1703088114. Epub 2017 Jul 17. Proc Natl Acad Sci U S A. 2017. PMID: 28716924 Free PMC article.
The Reference Genome of the Halophytic Plant Eutrema salsugineum.
Yang R, Jarvis DE, Chen H, Beilstein MA, Grimwood J, Jenkins J, Shu S, Prochnik S, Xin M, Ma C, Schmutz J, Wing RA, Mitchell-Olds T, Schumaker KS, Wang X. Yang R, et al. Among authors: prochnik s. Front Plant Sci. 2013 Mar 21;4:46. doi: 10.3389/fpls.2013.00046. eCollection 2013. Front Plant Sci. 2013. PMID: 23518688 Free PMC article.
Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity.
Bredeson JV, Lyons JB, Prochnik SE, Wu GA, Ha CM, Edsinger-Gonzales E, Grimwood J, Schmutz J, Rabbi IY, Egesi C, Nauluvula P, Lebot V, Ndunguru J, Mkamilo G, Bart RS, Setter TL, Gleadow RM, Kulakow P, Ferguson ME, Rounsley S, Rokhsar DS. Bredeson JV, et al. Among authors: prochnik se. Nat Biotechnol. 2016 May;34(5):562-70. doi: 10.1038/nbt.3535. Epub 2016 Apr 18. Nat Biotechnol. 2016. PMID: 27088722 Free article.
29 results