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Integrated physical, genetic and genome map of chickpea (Cicer arietinum L.).
Varshney RK, Mir RR, Bhatia S, Thudi M, Hu Y, Azam S, Zhang Y, Jaganathan D, You FM, Gao J, Riera-Lizarazu O, Luo MC. Varshney RK, et al. Among authors: azam s. Funct Integr Genomics. 2014 Mar;14(1):59-73. doi: 10.1007/s10142-014-0363-6. Epub 2014 Mar 8. Funct Integr Genomics. 2014. PMID: 24610029 Free PMC article.
Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement.
Varshney RK, Song C, Saxena RK, Azam S, Yu S, Sharpe AG, Cannon S, Baek J, Rosen BD, Tar'an B, Millan T, Zhang X, Ramsay LD, Iwata A, Wang Y, Nelson W, Farmer AD, Gaur PM, Soderlund C, Penmetsa RV, Xu C, Bharti AK, He W, Winter P, Zhao S, Hane JK, Carrasquilla-Garcia N, Condie JA, Upadhyaya HD, Luo MC, Thudi M, Gowda CL, Singh NP, Lichtenzveig J, Gali KK, Rubio J, Nadarajan N, Dolezel J, Bansal KC, Xu X, Edwards D, Zhang G, Kahl G, Gil J, Singh KB, Datta SK, Jackson SA, Wang J, Cook DR. Varshney RK, et al. Among authors: azam s. Nat Biotechnol. 2013 Mar;31(3):240-6. doi: 10.1038/nbt.2491. Epub 2013 Jan 27. Nat Biotechnol. 2013. PMID: 23354103 Free article.
Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers.
Varshney RK, Chen W, Li Y, Bharti AK, Saxena RK, Schlueter JA, Donoghue MT, Azam S, Fan G, Whaley AM, Farmer AD, Sheridan J, Iwata A, Tuteja R, Penmetsa RV, Wu W, Upadhyaya HD, Yang SP, Shah T, Saxena KB, Michael T, McCombie WR, Yang B, Zhang G, Yang H, Wang J, Spillane C, Cook DR, May GD, Xu X, Jackson SA. Varshney RK, et al. Among authors: azam s. Nat Biotechnol. 2011 Nov 6;30(1):83-9. doi: 10.1038/nbt.2022. Nat Biotechnol. 2011. PMID: 22057054
Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome.
Azam S, Thakur V, Ruperao P, Shah T, Balaji J, Amindala B, Farmer AD, Studholme DJ, May GD, Edwards D, Jones JD, Varshney RK. Azam S, et al. Am J Bot. 2012 Feb;99(2):186-92. doi: 10.3732/ajb.1100419. Epub 2012 Feb 1. Am J Bot. 2012. PMID: 22301893 Free article.
A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies.
Ruperao P, Chan CK, Azam S, Karafiátová M, Hayashi S, Cížková J, Saxena RK, Simková H, Song C, Vrána J, Chitikineni A, Visendi P, Gaur PM, Millán T, Singh KB, Taran B, Wang J, Batley J, Doležel J, Varshney RK, Edwards D. Ruperao P, et al. Among authors: azam s. Plant Biotechnol J. 2014 Aug;12(6):778-86. doi: 10.1111/pbi.12182. Epub 2014 Apr 5. Plant Biotechnol J. 2014. PMID: 24702794 Free article.
Candidate gene analysis for determinacy in pigeonpea (Cajanus spp.).
Mir RR, Kudapa H, Srikanth S, Saxena RK, Sharma A, Azam S, Saxena K, Varma Penmetsa R, Varshney RK. Mir RR, et al. Among authors: azam s. Theor Appl Genet. 2014 Dec;127(12):2663-78. doi: 10.1007/s00122-014-2406-8. Epub 2014 Oct 21. Theor Appl Genet. 2014. PMID: 25331300 Free PMC article.
Comparative genomics and prediction of conditionally dispensable sequences in legume-infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors.
Williams AH, Sharma M, Thatcher LF, Azam S, Hane JK, Sperschneider J, Kidd BN, Anderson JP, Ghosh R, Garg G, Lichtenzveig J, Kistler HC, Shea T, Young S, Buck SA, Kamphuis LG, Saxena R, Pande S, Ma LJ, Varshney RK, Singh KB. Williams AH, et al. Among authors: azam s. BMC Genomics. 2016 Mar 5;17:191. doi: 10.1186/s12864-016-2486-8. BMC Genomics. 2016. PMID: 26945779 Free PMC article.
564 results