Okumura H - Search Results

1

SPring-8 BL41XU, a high-flux macromolecular crystallography beamline.

Hasegawa K, Shimizu N, Okumura H, Mizuno N, Baba S, Hirata K, Takeuchi T, Yamazaki H, Senba Y, Ohashi H, Yamamoto M, Kumasaka T. Hasegawa K, et al. Among authors: okumura h. J Synchrotron Radiat. 2013 Nov;20(Pt 6):910-3. doi: 10.1107/S0909049513022176. Epub 2013 Oct 2. J Synchrotron Radiat. 2013. PMID: 24121338 Free PMC article.

2

Dimeric structure of the uracil:proton symporter UraA provides mechanistic insights into the SLC4/23/26 transporters.

Yu X, Yang G, Yan C, Baylon JL, Jiang J, Fan H, Lu G, Hasegawa K, Okumura H, Wang T, Tajkhorshid E, Li S, Yan N. Yu X, et al. Among authors: okumura h. Cell Res. 2017 Aug;27(8):1020-1033. doi: 10.1038/cr.2017.83. Epub 2017 Jun 16. Cell Res. 2017. PMID: 28621327 Free PMC article.

3

X-ray dose-dependent structural changes of the [2Fe-2S] ferredoxin from Chlamydomonas reinhardtii.

Ohnishi Y, Muraki N, Kiyota D, Okumura H, Baba S, Kawano Y, Kumasaka T, Tanaka H, Kurisu G. Ohnishi Y, et al. Among authors: okumura h. J Biochem. 2020 Jun 1;167(6):549-555. doi: 10.1093/jb/mvaa045. J Biochem. 2020. PMID: 32282907

4

Coarse snapshots of oxygen-dissociation intermediates of a giant hemoglobin elucidated by determining the oxygen saturation in individual subunits in the crystalline state.

Numoto N, Kawano Y, Okumura H, Baba S, Fukumori Y, Miki K, Ito N. Numoto N, et al. Among authors: okumura h. IUCrJ. 2021 Sep 30;8(Pt 6):954-962. doi: 10.1107/S2052252521009386. eCollection 2021 Nov 1. IUCrJ. 2021. PMID: 34804547 Free PMC article.

5

In situ crystal data-collection and ligand-screening system at SPring-8.

Okumura H, Sakai N, Murakami H, Mizuno N, Nakamura Y, Ueno G, Masunaga T, Kawamura T, Baba S, Hasegawa K, Yamamoto M, Kumasaka T. Okumura H, et al. Acta Crystallogr F Struct Biol Commun. 2022 Jun 1;78(Pt 6):241-251. doi: 10.1107/S2053230X22005283. Epub 2022 May 27. Acta Crystallogr F Struct Biol Commun. 2022. PMID: 35647681 Free PMC article.

6

Structures of oxygen dissociation intermediates of 400 kDa V2 hemoglobin provide coarse snapshots of the protein allostery.

Numoto N, Onoda S, Kawano Y, Okumura H, Baba S, Fukumori Y, Miki K, Ito N. Numoto N, et al. Among authors: okumura h. Biophys Physicobiol. 2022 May 12;19:1-10. doi: 10.2142/biophysico.bppb-v19.0019. eCollection 2022. Biophys Physicobiol. 2022. PMID: 35797404 Free PMC article.

7

Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.

Rose SL, Baba S, Okumura H, Antonyuk SV, Sasaki D, Hedison TM, Shanmugam M, Heyes DJ, Scrutton NS, Kumasaka T, Tosha T, Eady RR, Yamamoto M, Hasnain SS. Rose SL, et al. Among authors: okumura h. Proc Natl Acad Sci U S A. 2022 Jul 26;119(30):e2205664119. doi: 10.1073/pnas.2205664119. Epub 2022 Jul 21. Proc Natl Acad Sci U S A. 2022. PMID: 35862453 Free PMC article.

8

The structure of the rat vitamin B₁₂ transporter TC and its complex with glutathionylcobalamin.

Bokhove M, Kawamura T, Okumura H, Goto S, Kawano Y, Werner S, Jarczowski F, Klimyuk V, Saito A, Kumasaka T. Bokhove M, et al. Among authors: okumura h. J Biol Chem. 2024 Apr 16;300(5):107289. doi: 10.1016/j.jbc.2024.107289. Online ahead of print. J Biol Chem. 2024. PMID: 38636663 Free PMC article.

9

Specific damage induced by X-ray radiation and structural changes in the primary photoreaction of bacteriorhodopsin.

Matsui Y, Sakai K, Murakami M, Shiro Y, Adachi Si, Okumura H, Kouyama T. Matsui Y, et al. Among authors: okumura h. J Mol Biol. 2002 Nov 29;324(3):469-81. doi: 10.1016/s0022-2836(02)01110-5. J Mol Biol. 2002. PMID: 12445782

10

Crystal structure of the M intermediate of bacteriorhodopsin: allosteric structural changes mediated by sliding movement of a transmembrane helix.

Takeda K, Matsui Y, Kamiya N, Adachi S, Okumura H, Kouyama T. Takeda K, et al. Among authors: okumura h. J Mol Biol. 2004 Aug 20;341(4):1023-37. doi: 10.1016/j.jmb.2004.06.080. J Mol Biol. 2004. PMID: 15328615

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