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Janus--a comprehensive tool investigating the two faces of transcription.
Barann M, Esser D, Klostermeier UC, Lappalainen T, Luzius A, Kuiper JW, Ammerpohl O, Vater I, Siebert R, Amstislavskiy V, Sudbrak R, Lehrach H, Schreiber S, Rosenstiel P. Barann M, et al. Among authors: vater i. Bioinformatics. 2013 Jul 1;29(13):1600-6. doi: 10.1093/bioinformatics/btt185. Epub 2013 Apr 24. Bioinformatics. 2013. PMID: 23620359
GeneChip analyses point to novel pathogenetic mechanisms in mantle cell lymphoma.
Vater I, Wagner F, Kreuz M, Berger H, Martín-Subero JI, Pott C, Martinez-Climent JA, Klapper W, Krause K, Dyer MJ, Gesk S, Harder L, Zamo A, Dreyling M, Hasenclever D, Arnold N, Siebert R. Vater I, et al. Br J Haematol. 2009 Feb;144(3):317-31. doi: 10.1111/j.1365-2141.2008.07443.x. Epub 2008 Nov 7. Br J Haematol. 2009. PMID: 19016712 Free article.
Hunting for the 5th base: Techniques for analyzing DNA methylation.
Ammerpohl O, Martín-Subero JI, Richter J, Vater I, Siebert R. Ammerpohl O, et al. Among authors: vater i. Biochim Biophys Acta. 2009 Sep;1790(9):847-62. doi: 10.1016/j.bbagen.2009.02.001. Epub 2009 Feb 9. Biochim Biophys Acta. 2009. PMID: 19364478 Review.
A comprehensive microarray-based DNA methylation study of 367 hematological neoplasms.
Martin-Subero JI, Ammerpohl O, Bibikova M, Wickham-Garcia E, Agirre X, Alvarez S, Brüggemann M, Bug S, Calasanz MJ, Deckert M, Dreyling M, Du MQ, Dürig J, Dyer MJ, Fan JB, Gesk S, Hansmann ML, Harder L, Hartmann S, Klapper W, Küppers R, Montesinos-Rongen M, Nagel I, Pott C, Richter J, Román-Gómez J, Seifert M, Stein H, Suela J, Trümper L, Vater I, Prosper F, Haferlach C, Cruz Cigudosa J, Siebert R. Martin-Subero JI, et al. Among authors: vater i. PLoS One. 2009 Sep 11;4(9):e6986. doi: 10.1371/journal.pone.0006986. PLoS One. 2009. PMID: 19750229 Free PMC article.
Statistical inference of allelic imbalance from transcriptome data.
Nothnagel M, Wolf A, Herrmann A, Szafranski K, Vater I, Brosch M, Huse K, Siebert R, Platzer M, Hampe J, Krawczak M. Nothnagel M, et al. Among authors: vater i. Hum Mutat. 2011 Jan;32(1):98-106. doi: 10.1002/humu.21396. Hum Mutat. 2011. PMID: 21120951
Genetic lesions of the TRAF3 and MAP3K14 genes in classical Hodgkin lymphoma.
Otto C, Giefing M, Massow A, Vater I, Gesk S, Schlesner M, Richter J, Klapper W, Hansmann ML, Siebert R, Küppers R. Otto C, et al. Among authors: vater i. Br J Haematol. 2012 Jun;157(6):702-8. doi: 10.1111/j.1365-2141.2012.09113.x. Epub 2012 Apr 3. Br J Haematol. 2012. PMID: 22469134 Free article. Clinical Trial.
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