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The zebrafish reference genome sequence and its relationship to the human genome.
Howe K, Clark MD, Torroja CF, Torrance J, Berthelot C, Muffato M, Collins JE, Humphray S, McLaren K, Matthews L, McLaren S, Sealy I, Caccamo M, Churcher C, Scott C, Barrett JC, Koch R, Rauch GJ, White S, Chow W, Kilian B, Quintais LT, Guerra-Assunção JA, Zhou Y, Gu Y, Yen J, Vogel JH, Eyre T, Redmond S, Banerjee R, Chi J, Fu B, Langley E, Maguire SF, Laird GK, Lloyd D, Kenyon E, Donaldson S, Sehra H, Almeida-King J, Loveland J, Trevanion S, Jones M, Quail M, Willey D, Hunt A, Burton J, Sims S, McLay K, Plumb B, Davis J, Clee C, Oliver K, Clark R, Riddle C, Elliot D, Threadgold G, Harden G, Ware D, Begum S, Mortimore B, Kerry G, Heath P, Phillimore B, Tracey A, Corby N, Dunn M, Johnson C, Wood J, Clark S, Pelan S, Griffiths G, Smith M, Glithero R, Howden P, Barker N, Lloyd C, Stevens C, Harley J, Holt K, Panagiotidis G, Lovell J, Beasley H, Henderson C, Gordon D, Auger K, Wright D, Collins J, Raisen C, Dyer L, Leung K, Robertson L, Ambridge K, Leongamornlert D, McGuire S, Gilderthorp R, Griffiths C, Manthravadi D, Nichol S, Barker G, Whitehead S, Kay M, Brown J, Murnane C, Gray E, Humphries M, Sycamore N, Barker D, Saunders D, Wallis J, Babbage A, Hammond S, Mashreghi-Mohammadi M, … See abstract for full author list ➔ Howe K, et al. Among authors: stemple dl. Nature. 2013 Apr 25;496(7446):498-503. doi: 10.1038/nature12111. Epub 2013 Apr 17. Nature. 2013. PMID: 23594743 Free PMC article.
A systematic genome-wide analysis of zebrafish protein-coding gene function.
Kettleborough RN, Busch-Nentwich EM, Harvey SA, Dooley CM, de Bruijn E, van Eeden F, Sealy I, White RJ, Herd C, Nijman IJ, Fényes F, Mehroke S, Scahill C, Gibbons R, Wali N, Carruthers S, Hall A, Yen J, Cuppen E, Stemple DL. Kettleborough RN, et al. Among authors: stemple dl. Nature. 2013 Apr 25;496(7446):494-7. doi: 10.1038/nature11992. Epub 2013 Apr 17. Nature. 2013. PMID: 23594742 Free PMC article.
Zebrafish models of cancer: progress and future challenges.
Yen J, White RM, Stemple DL. Yen J, et al. Among authors: stemple dl. Curr Opin Genet Dev. 2014 Feb;24(100):38-45. doi: 10.1016/j.gde.2013.11.003. Epub 2013 Dec 27. Curr Opin Genet Dev. 2014. PMID: 24657535 Free PMC article. Review.
Incorporating RNA-seq data into the zebrafish Ensembl genebuild.
Collins JE, White S, Searle SM, Stemple DL. Collins JE, et al. Among authors: stemple dl. Genome Res. 2012 Oct;22(10):2067-78. doi: 10.1101/gr.137901.112. Epub 2012 Jul 12. Genome Res. 2012. PMID: 22798491 Free PMC article.
Zebrafish Rab5 proteins and a role for Rab5ab in nodal signalling.
Kenyon EJ, Campos I, Bull JC, Williams PH, Stemple DL, Clark MD. Kenyon EJ, et al. Among authors: stemple dl. Dev Biol. 2015 Jan 15;397(2):212-24. doi: 10.1016/j.ydbio.2014.11.007. Epub 2014 Dec 3. Dev Biol. 2015. PMID: 25478908 Free PMC article.
124 results