Amador-Noguez D - Search Results

1

Ultrasensitive regulation of anapleurosis via allosteric activation of PEP carboxylase.

Xu YF, Amador-Noguez D, Reaves ML, Feng XJ, Rabinowitz JD. Xu YF, et al. Nat Chem Biol. 2012 Apr 22;8(6):562-8. doi: 10.1038/nchembio.941. Nat Chem Biol. 2012. PMID: 22522319 Free PMC article.

2

Metabolite concentrations, fluxes and free energies imply efficient enzyme usage.

Park JO, Rubin SA, Xu YF, Amador-Noguez D, Fan J, Shlomi T, Rabinowitz JD. Park JO, et al. Nat Chem Biol. 2016 Jul;12(7):482-9. doi: 10.1038/nchembio.2077. Epub 2016 May 2. Nat Chem Biol. 2016. PMID: 27159581 Free PMC article.

3

Near-equilibrium glycolysis supports metabolic homeostasis and energy yield.

Park JO, Tanner LB, Wei MH, Khana DB, Jacobson TB, Zhang Z, Rubin SA, Li SH, Higgins MB, Stevenson DM, Amador-Noguez D, Rabinowitz JD. Park JO, et al. Nat Chem Biol. 2019 Oct;15(10):1001-1008. doi: 10.1038/s41589-019-0364-9. Epub 2019 Sep 23. Nat Chem Biol. 2019. PMID: 31548693 Free PMC article.

4

Systems-level metabolic flux profiling elucidates a complete, bifurcated tricarboxylic acid cycle in Clostridium acetobutylicum.

Amador-Noguez D, Feng XJ, Fan J, Roquet N, Rabitz H, Rabinowitz JD. Amador-Noguez D, et al. J Bacteriol. 2010 Sep;192(17):4452-61. doi: 10.1128/JB.00490-10. Epub 2010 Jul 9. J Bacteriol. 2010. PMID: 20622067 Free PMC article.

5

Metabolome remodeling during the acidogenic-solventogenic transition in Clostridium acetobutylicum.

Amador-Noguez D, Brasg IA, Feng XJ, Roquet N, Rabinowitz JD. Amador-Noguez D, et al. Appl Environ Microbiol. 2011 Nov;77(22):7984-97. doi: 10.1128/AEM.05374-11. Epub 2011 Sep 23. Appl Environ Microbiol. 2011. PMID: 21948824 Free PMC article.

6

Metabolomic analysis via reversed-phase ion-pairing liquid chromatography coupled to a stand alone orbitrap mass spectrometer.

Lu W, Clasquin MF, Melamud E, Amador-Noguez D, Caudy AA, Rabinowitz JD. Lu W, et al. Anal Chem. 2010 Apr 15;82(8):3212-21. doi: 10.1021/ac902837x. Anal Chem. 2010. PMID: 20349993 Free PMC article.

7

Evidence for an alternative glycolytic pathway in rapidly proliferating cells.

Vander Heiden MG, Locasale JW, Swanson KD, Sharfi H, Heffron GJ, Amador-Noguez D, Christofk HR, Wagner G, Rabinowitz JD, Asara JM, Cantley LC. Vander Heiden MG, et al. Science. 2010 Sep 17;329(5998):1492-9. doi: 10.1126/science.1188015. Science. 2010. PMID: 20847263 Free PMC article.

8

A metabolic pathway for catabolizing levulinic acid in bacteria.

Rand JM, Pisithkul T, Clark RL, Thiede JM, Mehrer CR, Agnew DE, Campbell CE, Markley AL, Price MN, Ray J, Wetmore KM, Suh Y, Arkin AP, Deutschbauer AM, Amador-Noguez D, Pfleger BF. Rand JM, et al. Nat Microbiol. 2017 Dec;2(12):1624-1634. doi: 10.1038/s41564-017-0028-z. Epub 2017 Sep 25. Nat Microbiol. 2017. PMID: 28947739 Free PMC article.

9

Steady-state metabolite concentrations reflect a balance between maximizing enzyme efficiency and minimizing total metabolite load.

Tepper N, Noor E, Amador-Noguez D, Haraldsdóttir HS, Milo R, Rabinowitz J, Liebermeister W, Shlomi T. Tepper N, et al. PLoS One. 2013 Sep 26;8(9):e75370. doi: 10.1371/journal.pone.0075370. eCollection 2013. PLoS One. 2013. PMID: 24086517 Free PMC article.

10

In Vivo Thermodynamic Analysis of Glycolysis in Clostridium thermocellum and Thermoanaerobacterium saccharolyticum Using ¹³C and ²H Tracers.

Jacobson TB, Korosh TK, Stevenson DM, Foster C, Maranas C, Olson DG, Lynd LR, Amador-Noguez D. Jacobson TB, et al. mSystems. 2020 Mar 17;5(2):e00736-19. doi: 10.1128/mSystems.00736-19. mSystems. 2020. PMID: 32184362 Free PMC article.

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