Marcotte EM - Search Results

1

Insights into the regulation of protein abundance from proteomic and transcriptomic analyses.

Vogel C, Marcotte EM. Vogel C, et al. Among authors: marcotte em. Nat Rev Genet. 2012 Mar 13;13(4):227-32. doi: 10.1038/nrg3185. Nat Rev Genet. 2012. PMID: 22411467 Free PMC article. Review.

2

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.

Lu P, Vogel C, Wang R, Yao X, Marcotte EM. Lu P, et al. Among authors: marcotte em. Nat Biotechnol. 2007 Jan;25(1):117-24. doi: 10.1038/nbt1270. Epub 2006 Dec 24. Nat Biotechnol. 2007. PMID: 17187058

3

A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans.

Lee I, Lehner B, Crombie C, Wong W, Fraser AG, Marcotte EM. Lee I, et al. Among authors: marcotte em. Nat Genet. 2008 Feb;40(2):181-8. doi: 10.1038/ng.2007.70. Epub 2008 Jan 27. Nat Genet. 2008. PMID: 18223650

4

Calculating absolute and relative protein abundance from mass spectrometry-based protein expression data.

Vogel C, Marcotte EM. Vogel C, et al. Among authors: marcotte em. Nat Protoc. 2008;3(9):1444-51. doi: 10.1038/nport.2008.132. Nat Protoc. 2008. PMID: 18772871

5

The APEX Quantitative Proteomics Tool: generating protein quantitation estimates from LC-MS/MS proteomics results.

Braisted JC, Kuntumalla S, Vogel C, Marcotte EM, Rodrigues AR, Wang R, Huang ST, Ferlanti ES, Saeed AI, Fleischmann RD, Peterson SN, Pieper R. Braisted JC, et al. Among authors: marcotte em. BMC Bioinformatics. 2008 Dec 9;9:529. doi: 10.1186/1471-2105-9-529. BMC Bioinformatics. 2008. PMID: 19068132 Free PMC article.

6

Buffering by gene duplicates: an analysis of molecular correlates and evolutionary conservation.

Hannay K, Marcotte EM, Vogel C. Hannay K, et al. Among authors: marcotte em. BMC Genomics. 2008 Dec 16;9:609. doi: 10.1186/1471-2164-9-609. BMC Genomics. 2008. PMID: 19087332 Free PMC article.

7

Integrating shotgun proteomics and mRNA expression data to improve protein identification.

Ramakrishnan SR, Vogel C, Prince JT, Li Z, Penalva LO, Myers M, Marcotte EM, Miranker DP, Wang R. Ramakrishnan SR, et al. Among authors: marcotte em. Bioinformatics. 2009 Jun 1;25(11):1397-403. doi: 10.1093/bioinformatics/btp168. Epub 2009 Mar 24. Bioinformatics. 2009. PMID: 19318424 Free PMC article.

8

Mining gene functional networks to improve mass-spectrometry-based protein identification.

Ramakrishnan SR, Vogel C, Kwon T, Penalva LO, Marcotte EM, Miranker DP. Ramakrishnan SR, et al. Among authors: marcotte em. Bioinformatics. 2009 Nov 15;25(22):2955-61. doi: 10.1093/bioinformatics/btp461. Epub 2009 Jul 24. Bioinformatics. 2009. PMID: 19633097 Free PMC article.

9

Absolute abundance for the masses.

Vogel C, Marcotte EM. Vogel C, et al. Among authors: marcotte em. Nat Biotechnol. 2009 Sep;27(9):825-6. doi: 10.1038/nbt0909-825. Nat Biotechnol. 2009. PMID: 19741640 Free PMC article.

10

Global signatures of protein and mRNA expression levels.

de Sousa Abreu R, Penalva LO, Marcotte EM, Vogel C. de Sousa Abreu R, et al. Among authors: marcotte em. Mol Biosyst. 2009 Dec;5(12):1512-26. doi: 10.1039/b908315d. Epub 2009 Oct 1. Mol Biosyst. 2009. PMID: 20023718 Free PMC article. Review.

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