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From crystal and NMR structures, footprints and cryo-electron-micrographs to large and soft structures: nanoscale modeling of the nucleosomal stem.
Meyer S, Becker NB, Syed SH, Goutte-Gattat D, Shukla MS, Hayes JJ, Angelov D, Bednar J, Dimitrov S, Everaers R. Meyer S, et al. Among authors: everaers r. Nucleic Acids Res. 2011 Nov;39(21):9139-54. doi: 10.1093/nar/gkr573. Epub 2011 Aug 10. Nucleic Acids Res. 2011. PMID: 21835779 Free PMC article.
., Goutte-Gattat,D., Becker,N., Meyer,S., Shukla,M.S., Hayes,J.J., Everaers,R., Angelov,D., Bednar,J. and Dimitrov,S. (2010) Single-base resolution mapping of H1-nucleosome interactions and 3D organization of the nucleosome. ...
., Goutte-Gattat,D., Becker,N., Meyer,S., Shukla,M.S., Hayes,J.J., Everaers,R., Angelov,D., Bednar,J. and Dimitrov,S. (2010) S …
From rigid base pairs to semiflexible polymers: coarse-graining DNA.
Becker NB, Everaers R. Becker NB, et al. Among authors: everaers r. Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Aug;76(2 Pt 1):021923. doi: 10.1103/PhysRevE.76.021923. Epub 2007 Aug 22. Phys Rev E Stat Nonlin Soft Matter Phys. 2007. PMID: 17930081
DNA nanomechanics in the nucleosome.
Becker NB, Everaers R. Becker NB, et al. Among authors: everaers r. Structure. 2009 Apr 15;17(4):579-89. doi: 10.1016/j.str.2009.01.013. Structure. 2009. PMID: 19368891 Free article.
Comment on "Remeasuring the double helix".
Becker NB, Everaers R. Becker NB, et al. Among authors: everaers r. Science. 2009 Jul 31;325(5940):538; author reply 538. doi: 10.1126/science.1168786. Science. 2009. PMID: 19644093
Looping probabilities in model interphase chromosomes.
Rosa A, Becker NB, Everaers R. Rosa A, et al. Among authors: everaers r. Biophys J. 2010 Jun 2;98(11):2410-9. doi: 10.1016/j.bpj.2010.01.054. Biophys J. 2010. PMID: 20513384 Free PMC article.
The radial distribution function of worm-like chains.
Becker NB, Rosa A, Everaers R. Becker NB, et al. Among authors: everaers r. Eur Phys J E Soft Matter. 2010 May;32(1):53-69. doi: 10.1140/epje/i2010-10596-0. Epub 2010 Jun 2. Eur Phys J E Soft Matter. 2010. PMID: 20517631
53 results