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KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and metabolite co-accumulation and omics data.
Sakurai N, Ara T, Ogata Y, Sano R, Ohno T, Sugiyama K, Hiruta A, Yamazaki K, Yano K, Aoki K, Aharoni A, Hamada K, Yokoyama K, Kawamura S, Otsuka H, Tokimatsu T, Kanehisa M, Suzuki H, Saito K, Shibata D. Sakurai N, et al. Among authors: yokoyama k. Nucleic Acids Res. 2011 Jan;39(Database issue):D677-84. doi: 10.1093/nar/gkq989. Epub 2010 Nov 19. Nucleic Acids Res. 2011. PMID: 21097783 Free PMC article.
OryzaExpress: an integrated database of gene expression networks and omics annotations in rice.
Hamada K, Hongo K, Suwabe K, Shimizu A, Nagayama T, Abe R, Kikuchi S, Yamamoto N, Fujii T, Yokoyama K, Tsuchida H, Sano K, Mochizuki T, Oki N, Horiuchi Y, Fujita M, Watanabe M, Matsuoka M, Kurata N, Yano K. Hamada K, et al. Among authors: yokoyama k. Plant Cell Physiol. 2011 Feb;52(2):220-9. doi: 10.1093/pcp/pcq195. Epub 2010 Dec 23. Plant Cell Physiol. 2011. PMID: 21186175 Free PMC article.
Plant Omics Data Center: an integrated web repository for interspecies gene expression networks with NLP-based curation.
Ohyanagi H, Takano T, Terashima S, Kobayashi M, Kanno M, Morimoto K, Kanegae H, Sasaki Y, Saito M, Asano S, Ozaki S, Kudo T, Yokoyama K, Aya K, Suwabe K, Suzuki G, Aoki K, Kubo Y, Watanabe M, Matsuoka M, Yano K. Ohyanagi H, et al. Among authors: yokoyama k. Plant Cell Physiol. 2015 Jan;56(1):e9. doi: 10.1093/pcp/pcu188. Epub 2014 Dec 11. Plant Cell Physiol. 2015. PMID: 25505034 Free PMC article.
The Arabidopsis TAC Position Viewer: a high-resolution map of transformation-competent artificial chromosome (TAC) clones aligned with the Arabidopsis thaliana Columbia-0 genome.
Hirose Y, Suda K, Liu YG, Sato S, Nakamura Y, Yokoyama K, Yamamoto N, Hanano S, Takita E, Sakurai N, Suzuki H, Nakamura Y, Kaneko T, Yano K, Tabata S, Shibata D. Hirose Y, et al. Among authors: yokoyama k. Plant J. 2015 Sep;83(6):1114-22. doi: 10.1111/tpj.12949. Plant J. 2015. PMID: 26227242 Free article.
TOMATOMICS: A Web Database for Integrated Omics Information in Tomato.
Kudo T, Kobayashi M, Terashima S, Katayama M, Ozaki S, Kanno M, Saito M, Yokoyama K, Ohyanagi H, Aoki K, Kubo Y, Yano K. Kudo T, et al. Among authors: yokoyama k. Plant Cell Physiol. 2017 Jan 1;58(1):e8. doi: 10.1093/pcp/pcw207. Plant Cell Physiol. 2017. PMID: 28111364 Free PMC article.
3,313 results