Gao Y - Search Results

1

Ab initio identification of transcription start sites in the Rhesus macaque genome by histone modification and RNA-Seq.

Liu Y, Han D, Han Y, Yan Z, Xie B, Li J, Qiao N, Hu H, Khaitovich P, Gao Y, Han JD. Liu Y, et al. Among authors: gao y. Nucleic Acids Res. 2011 Mar;39(4):1408-18. doi: 10.1093/nar/gkq956. Epub 2010 Oct 14. Nucleic Acids Res. 2011. PMID: 20952408 Free PMC article.

2

Delivering noninvasive prenatal testing in a clinical setting using semiconductor sequencing platform.

Gao Y, Xie B, Liu R. Gao Y, et al. Sci China Life Sci. 2014 Jul;57(7):737-8. doi: 10.1007/s11427-014-4696-0. Epub 2014 Jun 26. Sci China Life Sci. 2014. PMID: 24969704 No abstract available.

3

Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing.

Li JB, Levanon EY, Yoon JK, Aach J, Xie B, Leproust E, Zhang K, Gao Y, Church GM. Li JB, et al. Among authors: gao y. Science. 2009 May 29;324(5931):1210-3. doi: 10.1126/science.1170995. Science. 2009. PMID: 19478186

4

Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation.

Gilchrist DA, Dos Santos G, Fargo DC, Xie B, Gao Y, Li L, Adelman K. Gilchrist DA, et al. Among authors: gao y. Cell. 2010 Nov 12;143(4):540-51. doi: 10.1016/j.cell.2010.10.004. Cell. 2010. PMID: 21074046 Free PMC article.

5

Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells.

Ball MP, Li JB, Gao Y, Lee JH, LeProust EM, Park IH, Xie B, Daley GQ, Church GM. Ball MP, et al. Among authors: gao y. Nat Biotechnol. 2009 Apr;27(4):361-8. doi: 10.1038/nbt.1533. Epub 2009 Mar 29. Nat Biotechnol. 2009. PMID: 19329998 Free PMC article.

6

Multiplex padlock targeted sequencing reveals human hypermutable CpG variations.

Li JB, Gao Y, Aach J, Zhang K, Kryukov GV, Xie B, Ahlford A, Yoon JK, Rosenbaum AM, Zaranek AW, LeProust E, Sunyaev SR, Church GM. Li JB, et al. Among authors: gao y. Genome Res. 2009 Sep;19(9):1606-15. doi: 10.1101/gr.092213.109. Epub 2009 Jun 12. Genome Res. 2009. PMID: 19525355 Free PMC article.

7

Detecting miRNAs in deep-sequencing data: a software performance comparison and evaluation.

Williamson V, Kim A, Xie B, McMichael GO, Gao Y, Vladimirov V. Williamson V, et al. Among authors: gao y. Brief Bioinform. 2013 Jan;14(1):36-45. doi: 10.1093/bib/bbs010. Epub 2012 Mar 24. Brief Bioinform. 2013. PMID: 23334922 Free PMC article.

8

Genome-wide roles of Foxa2 in directing liver specification.

Xu C, Lu X, Chen EZ, He Z, Uyunbilig B, Li G, Ma Y, Hui L, Xie B, Gao Y, Ding X, Hu Y, Hu P, Han JD, Wang X. Xu C, et al. Among authors: gao y. J Mol Cell Biol. 2012 Dec;4(6):420-2. doi: 10.1093/jmcb/mjs037. Epub 2012 Jun 28. J Mol Cell Biol. 2012. PMID: 22750789 Free PMC article. No abstract available.

9

The prevalence and regulation of antisense transcripts in Schizosaccharomyces pombe.

Ni T, Tu K, Wang Z, Song S, Wu H, Xie B, Scott KC, Grewal SI, Gao Y, Zhu J. Ni T, et al. Among authors: gao y. PLoS One. 2010 Dec 20;5(12):e15271. doi: 10.1371/journal.pone.0015271. PLoS One. 2010. PMID: 21187966 Free PMC article.

10

RNA-Seq-based toxicogenomic assessment of fresh frozen and formalin-fixed tissues yields similar mechanistic insights.

Auerbach SS, Phadke DP, Mav D, Holmgren S, Gao Y, Xie B, Shin JH, Shah RR, Merrick BA, Tice RR. Auerbach SS, et al. Among authors: gao y. J Appl Toxicol. 2015 Jul;35(7):766-80. doi: 10.1002/jat.3068. Epub 2014 Nov 6. J Appl Toxicol. 2015. PMID: 25378103

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