De Bie T - Search Results

1

ModuleDigger: an itemset mining framework for the detection of cis-regulatory modules.

Sun H, De Bie T, Storms V, Fu Q, Dhollander T, Lemmens K, Verstuyf A, De Moor B, Marchal K. Sun H, et al. Among authors: de moor b, de bie t. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S30. doi: 10.1186/1471-2105-10-S1-S30. BMC Bioinformatics. 2009. PMID: 19208131 Free PMC article.

2

Inferring transcriptional modules from ChIP-chip, motif and microarray data.

Lemmens K, Dhollander T, De Bie T, Monsieurs P, Engelen K, Smets B, Winderickx J, De Moor B, Marchal K. Lemmens K, et al. Among authors: de moor b, de bie t. Genome Biol. 2006;7(5):R37. doi: 10.1186/gb-2006-7-5-r37. Epub 2006 May 5. Genome Biol. 2006. PMID: 16677396 Free PMC article.

3

Discovering transcriptional modules from motif, chip-chip and microarray data.

De Bie T, Monsieurs P, Engelen K, De Moor B, Cristianini N, Marchal K. De Bie T, et al. Among authors: de moor b. Pac Symp Biocomput. 2005:483-94. Pac Symp Biocomput. 2005. PMID: 15759653 Free article.

4

DISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli.

Lemmens K, De Bie T, Dhollander T, De Keersmaecker SC, Thijs IM, Schoofs G, De Weerdt A, De Moor B, Vanderleyden J, Collado-Vides J, Engelen K, Marchal K. Lemmens K, et al. Among authors: de weerdt a, de moor b, de keersmaecker sc, de bie t. Genome Biol. 2009;10(3):R27. doi: 10.1186/gb-2009-10-3-r27. Epub 2009 Mar 6. Genome Biol. 2009. PMID: 19265557 Free PMC article.

5

The condition-dependent transcriptional network in Escherichia coli.

Lemmens K, De Bie T, Dhollander T, Monsieurs P, De Moor B, Collado-Vides J, Engelen K, Marchal K. Lemmens K, et al. Among authors: de moor b, de bie t. Ann N Y Acad Sci. 2009 Mar;1158:29-35. doi: 10.1111/j.1749-6632.2008.03746.x. Ann N Y Acad Sci. 2009. PMID: 19348629

6

Integrating microarray and proteomics data to predict the response on cetuximab in patients with rectal cancer.

Daemen A, Gevaert O, De Bie T, Debucquoy A, Machiels JP, De Moor B, Haustermans K. Daemen A, et al. Among authors: de moor b, de bie t. Pac Symp Biocomput. 2008:166-77. Pac Symp Biocomput. 2008. PMID: 18229684 Free article. Clinical Trial.

7

A statistical framework for genomic data fusion.

Lanckriet GR, De Bie T, Cristianini N, Jordan MI, Noble WS. Lanckriet GR, et al. Among authors: de bie t. Bioinformatics. 2004 Nov 1;20(16):2626-35. doi: 10.1093/bioinformatics/bth294. Epub 2004 May 6. Bioinformatics. 2004. PMID: 15130933

8

CAFE: a computational tool for the study of gene family evolution.

De Bie T, Cristianini N, Demuth JP, Hahn MW. De Bie T, et al. Bioinformatics. 2006 May 15;22(10):1269-71. doi: 10.1093/bioinformatics/btl097. Epub 2006 Mar 16. Bioinformatics. 2006. PMID: 16543274

9

Estimating the tempo and mode of gene family evolution from comparative genomic data.

Hahn MW, De Bie T, Stajich JE, Nguyen C, Cristianini N. Hahn MW, et al. Among authors: de bie t. Genome Res. 2005 Aug;15(8):1153-60. doi: 10.1101/gr.3567505. Genome Res. 2005. PMID: 16077014 Free PMC article.

10

Kernel-based data fusion for gene prioritization.

De Bie T, Tranchevent LC, van Oeffelen LM, Moreau Y. De Bie T, et al. Bioinformatics. 2007 Jul 1;23(13):i125-32. doi: 10.1093/bioinformatics/btm187. Bioinformatics. 2007. PMID: 17646288

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