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CoCo-ST: Comparing and Contrasting Spatial Transcriptomics data sets using graph contrastive learning.
Wu J, Aminu M, Zhu B, Vokes N, Chen H, Hong L, Li J, Fujimoto J, Poteete A, Nilsson M, Li X, Cascone T, Jaffray D, Navin N, Byers L, Gibbons D, Heymach J, Chen K, Cheng C, Zhang J, Yang Y, Wang T, Wang B. Wu J, et al. Among authors: gibbons d. Res Sq [Preprint]. 2024 May 20:rs.3.rs-4359834. doi: 10.21203/rs.3.rs-4359834/v1. Res Sq. 2024. PMID: 38826463 Free PMC article. Preprint.
The evolution of lung adenocarcinoma precursors is associated with chromosomal instability and transition from innate to adaptive immune response/evasion.
Zhang J, Hu X, Zhu B, Vokes N, Fukuoka J, Alvarez FR, Heeke S, Moreira A, Solis L, Haymaker C, Velcheti V, Sterman D, Pass H, Cheng C, Lee J, Zhang J, Wei Z, Wu J, Li X, Ostrin E, Toumazis I, Gibbons D, Su D, Fukuoka J, Antonoff M, Gerber D, Li C, Kadara H, Wang L, Davis M, Heymach J, Hanash S, Wistuba I, Dubinett S, Alexandrov L, Lippman S, Spira A, Futreal A, Reuben A. Zhang J, et al. Among authors: gibbons d. Res Sq [Preprint]. 2024 May 15:rs.3.rs-4396272. doi: 10.21203/rs.3.rs-4396272/v1. Res Sq. 2024. PMID: 38798564 Free PMC article. Preprint.
Joint multi-omics discriminant analysis with consistent representation learning using PANDA.
Wu J, Aminu M, Hong L, Vokes N, Schmidt S, Saad MB, Zhu B, Li X, Cascone T, Sheshadri A, Jaffray D, Futreal A, Lee J, Byers L, Gibbons D, Heymach J, Chen K, Cheng C, Zhang J, Wang B. Wu J, et al. Among authors: gibbons d. Res Sq [Preprint]. 2024 May 17:rs.3.rs-4353037. doi: 10.21203/rs.3.rs-4353037/v1. Res Sq. 2024. PMID: 38798352 Free PMC article. Preprint.
Directions to overcome therapy resistance in cancer.
Nussinov R, Weichhart T, Dlamini Z, Gibbons DL, Van Seuningen I, Konen J, Ju HQ. Nussinov R, et al. Among authors: gibbons dl. Trends Pharmacol Sci. 2024 May 16:S0165-6147(24)00093-2. doi: 10.1016/j.tips.2024.05.001. Online ahead of print. Trends Pharmacol Sci. 2024. PMID: 38760267 No abstract available.
TACO: A Turkish database for abstract concepts.
Conca F, Gibbons DM, Bayram B, Incesoy EI, Tacchini M, Düzel E, Cappa SF, Catricalà E. Conca F, et al. Among authors: gibbons dm. Behav Res Methods. 2024 Apr 29. doi: 10.3758/s13428-024-02428-x. Online ahead of print. Behav Res Methods. 2024. PMID: 38684624
628 results