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An analysis of the epitope knowledge related to Mycobacteria.
Blythe MJ, Zhang Q, Vaughan K, de Castro R Jr, Salimi N, Bui HH, Lewinsohn DM, Ernst JD, Peters B, Sette A. Blythe MJ, et al. Among authors: bui hh. Immunome Res. 2007 Dec 14;3:10. doi: 10.1186/1745-7580-3-10. Immunome Res. 2007. PMID: 18081934 Free PMC article.
The immune epitope database and analysis resource: from vision to blueprint.
Peters B, Sidney J, Bourne P, Bui HH, Buus S, Doh G, Fleri W, Kronenberg M, Kubo R, Lund O, Nemazee D, Ponomarenko JV, Sathiamurthy M, Schoenberger S, Stewart S, Surko P, Way S, Wilson S, Sette A. Peters B, et al. Among authors: bui hh. PLoS Biol. 2005 Mar;3(3):e91. doi: 10.1371/journal.pbio.0030091. PLoS Biol. 2005. PMID: 15760272 Free PMC article.
Curation of complex, context-dependent immunological data.
Vita R, Vaughan K, Zarebski L, Salimi N, Fleri W, Grey H, Sathiamurthy M, Mokili J, Bui HH, Bourne PE, Ponomarenko J, de Castro R Jr, Chan RK, Sidney J, Wilson SS, Stewart S, Way S, Peters B, Sette A. Vita R, et al. Among authors: bui hh. BMC Bioinformatics. 2006 Jul 12;7:341. doi: 10.1186/1471-2105-7-341. BMC Bioinformatics. 2006. PMID: 16836764 Free PMC article.
Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools.
Greenbaum JA, Andersen PH, Blythe M, Bui HH, Cachau RE, Crowe J, Davies M, Kolaskar AS, Lund O, Morrison S, Mumey B, Ofran Y, Pellequer JL, Pinilla C, Ponomarenko JV, Raghava GP, van Regenmortel MH, Roggen EL, Sette A, Schlessinger A, Sollner J, Zand M, Peters B. Greenbaum JA, et al. Among authors: bui hh. J Mol Recognit. 2007 Mar-Apr;20(2):75-82. doi: 10.1002/jmr.815. J Mol Recognit. 2007. PMID: 17205610 Review.
Protein sequence database for pathogenic arenaviruses.
Bui HH, Botten J, Fusseder N, Pasquetto V, Mothe B, Buchmeier MJ, Sette A. Bui HH, et al. Immunome Res. 2007 Feb 8;3:1. doi: 10.1186/1745-7580-3-1. Immunome Res. 2007. PMID: 17288609 Free PMC article.
Immune epitope database analysis resource (IEDB-AR).
Zhang Q, Wang P, Kim Y, Haste-Andersen P, Beaver J, Bourne PE, Bui HH, Buus S, Frankild S, Greenbaum J, Lund O, Lundegaard C, Nielsen M, Ponomarenko J, Sette A, Zhu Z, Peters B. Zhang Q, et al. Among authors: bui hh. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W513-8. doi: 10.1093/nar/gkn254. Epub 2008 May 31. Nucleic Acids Res. 2008. PMID: 18515843 Free PMC article.
103 results